Top 10 genes with highest correlation to Rv3556c/fadA6:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3544c/fadE28 | (cc=0.8239) | info on Rv3544c/fadE28 |
| Rv3502c/- | (cc=0.8119) | info on Rv3502c/- |
| Rv3542c/- | (cc=0.7772) | info on Rv3542c/- |
| Rv3551/- | (cc=0.7748) | info on Rv3551/- |
| Rv3569c/hsaD | (cc=0.7685) | info on Rv3569c/hsaD |
| Rv3870/eccCa1 | (cc=0.7445) | info on Rv3870/eccCa1 |
| Rv0485/- | (cc=0.7419) | info on Rv0485/- |
| Rv1568/bioA | (cc=0.7338) | info on Rv1568/bioA |
| Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
| Rv3552/- | (cc=0.7122) | info on Rv3552/- |
Correlation of Rv3556c/fadA6 with Rv3552/-
Normalized LFCs for Rv3556c/fadA6:
(description and provenance of datasets)
| Rv3556c/fadA6 | Rv3552/- | |
| Fe_supp_jason_reseq | -1.066 | -0.559 |
| low_pH_jason_reseq | 0.785 | -0.801 |
| NO_jason_reseq | -0.94 | -0.255 |
| B6_jason_reseq | -2.783 | -2.443 |
| MHCII_jason_reseq | -2.743 | -1.677 |
| Isoniazid02 | -2.357 | -0.351 |
| Rifampicin4 | 0.252 | 0.428 |
| Ethambutol3 | -2.213 | -0.333 |
| Meropenem3 | -1.137 | 2.904 |
| Vancomycin16 | -0.708 | 0.215 |
| Rv2680_day32 | -3.017 | -1.711 |
| H37Rv_KO_MarP | 0.485 | -0.08 |
| hypoxia_3wks | 0.359 | -0.447 |
| hypoxia_6wks | -0.065 | 0.288 |
| glycerol | 0.063 | -1.195 |
| cholesterol | -2.856 | -1.981 |
| AJ | -3.15 | -3.173 |
| Bibs02 | -3.606 | -2.501 |
| Bibs02c | -3.24 | -2.862 |
| BL6 | -2.467 | -1.27 |
| BL6a | -3.709 | -2.33 |
| BXD01 | -1.929 | -0.331 |
| BXD010 | -2.525 | -0.373 |
| BXD011 | -1.589 | -0.96 |
| BXD03 | -2.666 | 0.0 |
| BXD04 | -1.679 | -0.271 |
| BXD05 | -1.993 | -1.583 |
| BXD06 | -2.5 | -1.26 |
| BXD07 | -2.145 | -1.629 |
| BXD08 | -1.969 | -1.165 |
| BXD09 | -2.176 | -1.142 |
| CAST | -3.265 | -3.15 |
| CCcont | -0.465 | 0.531 |
| DS01 | -4.423 | -3.23 |
| DS02 | -2.117 | -2.974 |
| DS04 | -1.067 | -2.282 |
| DS0c | -3.212 | -2.967 |
| GP01 | -1.529 | -1.162 |
| GP02 | -1.482 | -1.138 |
| GP0c | 1.107 | 0.325 |
| NOD | -3.479 | -3.072 |
| NZO | -3.553 | -2.728 |
| PWK | -3.038 | -2.683 |
| H37Rv_KO_CtpC | -2.516 | -2.222 |
| H37Rv_KO_CtpD | -1.396 | -1.385 |
| H37Rv_KO_Rv1272 | -0.978 | -1.659 |
| H37Rv_KO_SugABC | -0.657 | 0.352 |
| H37Rv_KO_MbtN | -1.136 | -0.61 |
| Trans05 | -2.117 | -1.327 |
| macrophage_unactivated | -0.085 | -0.871 |
| IL1 | -2.581 | -2.61 |
| Rapamycin | -1.135 | -0.509 |
| Tcell | -4.132 | -2.333 |
| GMCSF | 0.834 | -0.084 |
| IFNab | 2.007 | 2.304 |
| IFNg | 0.281 | -0.946 |
| IFNg_GMCSF1 | 0.167 | -3.777 |
| Rv1432_day32 | -4.43 | -4.735 |
| Rv1565c_day32 | -1.797 | -0.766 |
| secA2_input | -1.083 | 1.043 |
| delta_Rv3594 | 1.055 | 1.221 |
| delta_Rv3717 | 0.736 | 0.151 |
| delta_Rv3811 | 0.934 | 1.392 |
| delta_Rv0954 | 1.16 | 0.985 |
| PonA1 | 1.191 | 2.575 |
| EccD1_KO | -0.326 | 1.365 |
| EspI_KO | -0.451 | 0.134 |
| PE35_KO | -0.505 | 0.884 |
| PPE68_KO | -0.857 | 1.661 |
| glycerol2 | -1.131 | -0.858 |
| lignocerate | -0.897 | -1.0 |
| oleate | 0.02 | -0.397 |
| phosphatidylcholine | -0.734 | -0.926 |
| acetate | -0.652 | -1.214 |
| glucAc | -1.199 | -1.35 |
| Rv0950ko | 0.292 | -1.194 |
| Rv1096ko | 0.784 | 0.492 |
| Rv3684ko | 0.37 | -0.498 |
| delta_otsA_trehalose | -1.662 | -0.542 |