Top 10 genes with highest correlation to Rv3556c/fadA6:
update plot | correlation | link to info on gene |
---|---|---|
Rv3544c/fadE28 | (cc=0.8239) | info on Rv3544c/fadE28 |
Rv3502c/- | (cc=0.8119) | info on Rv3502c/- |
Rv3542c/- | (cc=0.7772) | info on Rv3542c/- |
Rv3551/- | (cc=0.7748) | info on Rv3551/- |
Rv3569c/hsaD | (cc=0.7685) | info on Rv3569c/hsaD |
Rv3870/eccCa1 | (cc=0.7445) | info on Rv3870/eccCa1 |
Rv0485/- | (cc=0.7419) | info on Rv0485/- |
Rv1568/bioA | (cc=0.7338) | info on Rv1568/bioA |
Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
Rv3552/- | (cc=0.7122) | info on Rv3552/- |
Correlation of Rv3556c/fadA6 with Rv0485/-
Normalized LFCs for Rv3556c/fadA6:
(description and provenance of datasets)
Rv3556c/fadA6 | Rv0485/- | |
Fe_supp_jason_reseq | -1.066 | -0.56 |
low_pH_jason_reseq | 0.785 | -1.026 |
NO_jason_reseq | -0.94 | -2.242 |
B6_jason_reseq | -2.783 | -4.618 |
MHCII_jason_reseq | -2.743 | -3.592 |
Isoniazid02 | -2.357 | -0.454 |
Rifampicin4 | 0.252 | -0.393 |
Ethambutol3 | -2.213 | 0.181 |
Meropenem3 | -1.137 | -1.181 |
Vancomycin16 | -0.708 | -0.557 |
Rv2680_day32 | -3.017 | -3.166 |
H37Rv_KO_MarP | 0.485 | 0.24 |
hypoxia_3wks | 0.359 | 0.159 |
hypoxia_6wks | -0.065 | -0.722 |
glycerol | 0.063 | -0.413 |
cholesterol | -2.856 | -3.975 |
AJ | -3.15 | -4.686 |
Bibs02 | -3.606 | -3.876 |
Bibs02c | -3.24 | -3.778 |
BL6 | -2.467 | -3.118 |
BL6a | -3.709 | -4.417 |
BXD01 | -1.929 | -3.065 |
BXD010 | -2.525 | -3.013 |
BXD011 | -1.589 | -2.635 |
BXD03 | -2.666 | -3.015 |
BXD04 | -1.679 | -2.757 |
BXD05 | -1.993 | -2.718 |
BXD06 | -2.5 | -3.542 |
BXD07 | -2.145 | -3.674 |
BXD08 | -1.969 | -3.219 |
BXD09 | -2.176 | -3.306 |
CAST | -3.265 | -4.443 |
CCcont | -0.465 | -0.011 |
DS01 | -4.423 | -5.006 |
DS02 | -2.117 | -2.27 |
DS04 | -1.067 | -4.112 |
DS0c | -3.212 | -4.381 |
GP01 | -1.529 | -0.576 |
GP02 | -1.482 | -0.338 |
GP0c | 1.107 | -0.379 |
NOD | -3.479 | -2.302 |
NZO | -3.553 | -4.028 |
PWK | -3.038 | -2.842 |
H37Rv_KO_CtpC | -2.516 | -3.064 |
H37Rv_KO_CtpD | -1.396 | -1.944 |
H37Rv_KO_Rv1272 | -0.978 | -2.297 |
H37Rv_KO_SugABC | -0.657 | -1.715 |
H37Rv_KO_MbtN | -1.136 | -0.775 |
Trans05 | -2.117 | -3.074 |
macrophage_unactivated | -0.085 | 0.189 |
IL1 | -2.581 | 0.774 |
Rapamycin | -1.135 | 1.056 |
Tcell | -4.132 | -1.567 |
GMCSF | 0.834 | -0.945 |
IFNab | 2.007 | 0.441 |
IFNg | 0.281 | -1.403 |
IFNg_GMCSF1 | 0.167 | -1.697 |
Rv1432_day32 | -4.43 | -4.519 |
Rv1565c_day32 | -1.797 | -4.547 |
secA2_input | -1.083 | 0.492 |
delta_Rv3594 | 1.055 | 0.032 |
delta_Rv3717 | 0.736 | -0.671 |
delta_Rv3811 | 0.934 | -0.064 |
delta_Rv0954 | 1.16 | 0.862 |
PonA1 | 1.191 | 0.77 |
EccD1_KO | -0.326 | 0.174 |
EspI_KO | -0.451 | 0.297 |
PE35_KO | -0.505 | 0.193 |
PPE68_KO | -0.857 | 0.042 |
glycerol2 | -1.131 | 1.275 |
lignocerate | -0.897 | 0.315 |
oleate | 0.02 | -0.065 |
phosphatidylcholine | -0.734 | 0.77 |
acetate | -0.652 | -0.043 |
glucAc | -1.199 | -0.54 |
Rv0950ko | 0.292 | 0.377 |
Rv1096ko | 0.784 | 0.47 |
Rv3684ko | 0.37 | 0.262 |
delta_otsA_trehalose | -1.662 | -0.263 |