Top 10 genes with highest correlation to Rv3556c/fadA6:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3544c/fadE28 | (cc=0.8239) | info on Rv3544c/fadE28 |
| Rv3502c/- | (cc=0.8119) | info on Rv3502c/- |
| Rv3542c/- | (cc=0.7772) | info on Rv3542c/- |
| Rv3551/- | (cc=0.7748) | info on Rv3551/- |
| Rv3569c/hsaD | (cc=0.7685) | info on Rv3569c/hsaD |
| Rv3870/eccCa1 | (cc=0.7445) | info on Rv3870/eccCa1 |
| Rv0485/- | (cc=0.7419) | info on Rv0485/- |
| Rv1568/bioA | (cc=0.7338) | info on Rv1568/bioA |
| Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
| Rv3552/- | (cc=0.7122) | info on Rv3552/- |
Correlation of Rv3556c/fadA6 with Rv3544c/fadE28
Normalized LFCs for Rv3556c/fadA6:
(description and provenance of datasets)
| Rv3556c/fadA6 | Rv3544c/fadE28 | |
| Fe_supp_jason_reseq | -1.066 | -0.39 |
| low_pH_jason_reseq | 0.785 | -0.234 |
| NO_jason_reseq | -0.94 | 0.205 |
| B6_jason_reseq | -2.783 | -2.959 |
| MHCII_jason_reseq | -2.743 | -2.606 |
| Isoniazid02 | -2.357 | 0.044 |
| Rifampicin4 | 0.252 | 0.495 |
| Ethambutol3 | -2.213 | -0.036 |
| Meropenem3 | -1.137 | -0.359 |
| Vancomycin16 | -0.708 | 0.692 |
| Rv2680_day32 | -3.017 | -0.725 |
| H37Rv_KO_MarP | 0.485 | 0.442 |
| hypoxia_3wks | 0.359 | 0.475 |
| hypoxia_6wks | -0.065 | 0.267 |
| glycerol | 0.063 | 1.202 |
| cholesterol | -2.856 | -3.408 |
| AJ | -3.15 | -5.459 |
| Bibs02 | -3.606 | -4.302 |
| Bibs02c | -3.24 | -3.895 |
| BL6 | -2.467 | -2.705 |
| BL6a | -3.709 | -3.821 |
| BXD01 | -1.929 | -1.93 |
| BXD010 | -2.525 | -1.787 |
| BXD011 | -1.589 | -2.143 |
| BXD03 | -2.666 | -2.202 |
| BXD04 | -1.679 | -1.184 |
| BXD05 | -1.993 | -1.621 |
| BXD06 | -2.5 | -2.774 |
| BXD07 | -2.145 | -0.872 |
| BXD08 | -1.969 | -1.388 |
| BXD09 | -2.176 | -2.616 |
| CAST | -3.265 | -5.189 |
| CCcont | -0.465 | 0.243 |
| DS01 | -4.423 | -5.557 |
| DS02 | -2.117 | -5.117 |
| DS04 | -1.067 | -3.373 |
| DS0c | -3.212 | -4.69 |
| GP01 | -1.529 | -1.976 |
| GP02 | -1.482 | -1.665 |
| GP0c | 1.107 | -0.2 |
| NOD | -3.479 | -4.182 |
| NZO | -3.553 | -4.693 |
| PWK | -3.038 | -4.615 |
| H37Rv_KO_CtpC | -2.516 | -2.824 |
| H37Rv_KO_CtpD | -1.396 | -2.131 |
| H37Rv_KO_Rv1272 | -0.978 | -2.028 |
| H37Rv_KO_SugABC | -0.657 | 0.929 |
| H37Rv_KO_MbtN | -1.136 | 0.27 |
| Trans05 | -2.117 | -2.128 |
| macrophage_unactivated | -0.085 | -0.735 |
| IL1 | -2.581 | 0.0 |
| Rapamycin | -1.135 | 0.957 |
| Tcell | -4.132 | -3.314 |
| GMCSF | 0.834 | -0.18 |
| IFNab | 2.007 | 2.576 |
| IFNg | 0.281 | -0.323 |
| IFNg_GMCSF1 | 0.167 | -0.795 |
| Rv1432_day32 | -4.43 | -4.12 |
| Rv1565c_day32 | -1.797 | -2.426 |
| secA2_input | -1.083 | 1.204 |
| delta_Rv3594 | 1.055 | 1.358 |
| delta_Rv3717 | 0.736 | 0.964 |
| delta_Rv3811 | 0.934 | 1.451 |
| delta_Rv0954 | 1.16 | 1.18 |
| PonA1 | 1.191 | 2.063 |
| EccD1_KO | -0.326 | -0.852 |
| EspI_KO | -0.451 | -0.057 |
| PE35_KO | -0.505 | 0.642 |
| PPE68_KO | -0.857 | -0.128 |
| glycerol2 | -1.131 | 0.514 |
| lignocerate | -0.897 | -0.246 |
| oleate | 0.02 | 0.335 |
| phosphatidylcholine | -0.734 | -0.038 |
| acetate | -0.652 | -0.758 |
| glucAc | -1.199 | -0.612 |
| Rv0950ko | 0.292 | 0.874 |
| Rv1096ko | 0.784 | 0.458 |
| Rv3684ko | 0.37 | 0.691 |
| delta_otsA_trehalose | -1.662 | 0.993 |