Top 10 genes with highest correlation to Rv3555c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3378c/- | (cc=0.5967) | info on Rv3378c/- |
| Rv3150/nuoF | (cc=0.5941) | info on Rv3150/nuoF |
| Rv3146/nuoB | (cc=0.5937) | info on Rv3146/nuoB |
| Rv2374c/hrcA | (cc=0.5909) | info on Rv2374c/hrcA |
| Rv1213/glgC | (cc=0.5852) | info on Rv1213/glgC |
| Rv1058/fadD14 | (cc=0.5803) | info on Rv1058/fadD14 |
| Rv2071c/cobM | (cc=0.571) | info on Rv2071c/cobM |
| Rv1779c/- | (cc=0.5705) | info on Rv1779c/- |
| Rv0642c/mmaA4 | (cc=0.5699) | info on Rv0642c/mmaA4 |
| Rv0928/pstS3 | (cc=0.5563) | info on Rv0928/pstS3 |
Correlation of Rv3555c/- with Rv1058/fadD14
Normalized LFCs for Rv3555c/-:
(description and provenance of datasets)
| Rv3555c/- | Rv1058/fadD14 | |
| Fe_supp_jason_reseq | -1.642 | 0.845 |
| low_pH_jason_reseq | -0.427 | 2.618 |
| NO_jason_reseq | -0.158 | -0.323 |
| B6_jason_reseq | -3.052 | -1.356 |
| MHCII_jason_reseq | -0.977 | -0.435 |
| Isoniazid02 | -0.247 | -0.194 |
| Rifampicin4 | -0.523 | -0.116 |
| Ethambutol3 | -0.153 | 0.148 |
| Meropenem3 | 0.024 | 0.406 |
| Vancomycin16 | 0.0 | -0.544 |
| Rv2680_day32 | -0.916 | 1.435 |
| H37Rv_KO_MarP | 0.103 | -0.653 |
| hypoxia_3wks | -0.267 | 1.535 |
| hypoxia_6wks | -1.361 | 3.247 |
| glycerol | -0.554 | 1.09 |
| cholesterol | 0.864 | 1.217 |
| AJ | -0.297 | 1.03 |
| Bibs02 | -0.408 | 0.262 |
| Bibs02c | -1.881 | 1.816 |
| BL6 | 0.627 | 3.092 |
| BL6a | 0.785 | 2.987 |
| BXD01 | 1.705 | 3.11 |
| BXD010 | 0.278 | 2.481 |
| BXD011 | 0.87 | 2.298 |
| BXD03 | 1.032 | 1.948 |
| BXD04 | 2.404 | 2.976 |
| BXD05 | -0.056 | 2.087 |
| BXD06 | 1.189 | 2.618 |
| BXD07 | 1.662 | 2.642 |
| BXD08 | 1.208 | 2.699 |
| BXD09 | 1.228 | 2.228 |
| CAST | -1.49 | -0.222 |
| CCcont | 0.0 | 2.164 |
| DS01 | -0.197 | 0.14 |
| DS02 | -0.38 | 0.83 |
| DS04 | -0.984 | 0.975 |
| DS0c | -0.596 | 0.963 |
| GP01 | 2.544 | 2.962 |
| GP02 | 2.419 | 2.733 |
| GP0c | 2.452 | 2.85 |
| NOD | -0.392 | 0.997 |
| NZO | -1.011 | 0.675 |
| PWK | 0.61 | 0.281 |
| H37Rv_KO_CtpC | 1.632 | 0.877 |
| H37Rv_KO_CtpD | 1.273 | 1.601 |
| H37Rv_KO_Rv1272 | 0.351 | 2.677 |
| H37Rv_KO_SugABC | 0.865 | 3.098 |
| H37Rv_KO_MbtN | 0.118 | 1.92 |
| Trans05 | 1.333 | 2.268 |
| macrophage_unactivated | -1.13 | -0.123 |
| IL1 | 0.169 | -0.116 |
| Rapamycin | -0.878 | -0.371 |
| Tcell | 0.362 | 0.394 |
| GMCSF | -2.075 | -1.714 |
| IFNab | -1.312 | 0.284 |
| IFNg | -1.601 | -2.913 |
| IFNg_GMCSF1 | -1.882 | -2.599 |
| Rv1432_day32 | 0.0 | 2.88 |
| Rv1565c_day32 | 0.535 | 1.579 |
| secA2_input | -0.186 | 1.374 |
| delta_Rv3594 | -0.626 | 1.779 |
| delta_Rv3717 | -0.693 | 2.157 |
| delta_Rv3811 | -1.054 | 1.756 |
| delta_Rv0954 | -1.452 | 0.049 |
| PonA1 | -2.038 | -0.851 |
| EccD1_KO | -1.536 | -0.046 |
| EspI_KO | -0.279 | -0.365 |
| PE35_KO | -0.995 | -0.98 |
| PPE68_KO | -1.091 | -0.41 |
| glycerol2 | 0.601 | 1.219 |
| lignocerate | -0.505 | 1.649 |
| oleate | 0.425 | -1.157 |
| phosphatidylcholine | 0.482 | 0.655 |
| acetate | -0.883 | 0.712 |
| glucAc | -1.352 | 0.682 |
| Rv0950ko | -0.694 | -0.648 |
| Rv1096ko | 0.781 | 0.1 |
| Rv3684ko | 0.301 | -0.262 |
| delta_otsA_trehalose | 1.858 | -0.009 |