Top 10 genes with highest correlation to Rv3532/PPE61:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0166/fadD5 | (cc=0.624) | info on Rv0166/fadD5 |
| Rv2771c/- | (cc=0.5901) | info on Rv2771c/- |
| Rv2063A/mazF7 | (cc=0.5374) | info on Rv2063A/mazF7 |
| Rv0103c/ctpB | (cc=0.5366) | info on Rv0103c/ctpB |
| Rv3288c/usfY | (cc=0.5352) | info on Rv3288c/usfY |
| Rv2351c/plcA | (cc=0.5258) | info on Rv2351c/plcA |
| Rv1882c/- | (cc=0.5246) | info on Rv1882c/- |
| Rv1249c/- | (cc=0.5202) | info on Rv1249c/- |
| Rv3367/PE_PGRS51 | (cc=0.4921) | info on Rv3367/PE_PGRS51 |
| Rv0604/lpqO | (cc=0.4866) | info on Rv0604/lpqO |
Correlation of Rv3532/PPE61 with Rv1882c/-
Normalized LFCs for Rv3532/PPE61:
(description and provenance of datasets)
| Rv3532/PPE61 | Rv1882c/- | |
| Fe_supp_jason_reseq | -0.058 | 1.157 |
| low_pH_jason_reseq | -0.79 | -0.606 |
| NO_jason_reseq | -0.194 | -0.029 |
| B6_jason_reseq | 0.706 | 0.272 |
| MHCII_jason_reseq | 0.622 | 0.707 |
| Isoniazid02 | 0.501 | 0.179 |
| Rifampicin4 | 0.019 | -0.845 |
| Ethambutol3 | 0.798 | 0.218 |
| Meropenem3 | 0.187 | 0.199 |
| Vancomycin16 | 0.204 | -0.141 |
| Rv2680_day32 | -0.116 | -0.219 |
| H37Rv_KO_MarP | 0.203 | 0.676 |
| hypoxia_3wks | 0.096 | -0.247 |
| hypoxia_6wks | -0.129 | -0.255 |
| glycerol | 0.334 | -0.238 |
| cholesterol | 0.284 | 0.063 |
| AJ | 0.05 | 0.259 |
| Bibs02 | 0.313 | 0.204 |
| Bibs02c | 0.371 | -0.082 |
| BL6 | 0.12 | -0.31 |
| BL6a | -0.014 | -0.606 |
| BXD01 | -0.209 | -0.493 |
| BXD010 | -0.409 | -0.628 |
| BXD011 | 0.005 | -0.311 |
| BXD03 | 0.054 | -0.446 |
| BXD04 | -0.004 | -0.55 |
| BXD05 | 0.371 | -0.465 |
| BXD06 | -0.348 | -0.015 |
| BXD07 | -0.241 | -0.338 |
| BXD08 | -0.537 | -0.46 |
| BXD09 | -0.257 | -0.696 |
| CAST | 0.452 | -0.205 |
| CCcont | -0.011 | -0.393 |
| DS01 | 0.435 | 0.055 |
| DS02 | 0.317 | -0.228 |
| DS04 | 0.357 | -0.076 |
| DS0c | 0.731 | -0.165 |
| GP01 | 0.479 | 0.151 |
| GP02 | 0.504 | 0.244 |
| GP0c | -0.254 | -0.549 |
| NOD | 0.049 | 0.556 |
| NZO | 0.238 | 0.325 |
| PWK | 0.267 | -0.149 |
| H37Rv_KO_CtpC | 0.344 | 0.202 |
| H37Rv_KO_CtpD | 0.176 | -0.863 |
| H37Rv_KO_Rv1272 | 0.169 | 0.366 |
| H37Rv_KO_SugABC | 0.239 | 0.006 |
| H37Rv_KO_MbtN | -0.361 | 0.64 |
| Trans05 | -0.31 | -0.281 |
| macrophage_unactivated | -0.417 | -0.051 |
| IL1 | -0.427 | 0.273 |
| Rapamycin | -0.282 | 0.129 |
| Tcell | -0.156 | 0.283 |
| GMCSF | -0.259 | 0.283 |
| IFNab | 0.203 | -0.063 |
| IFNg | -0.086 | 0.056 |
| IFNg_GMCSF1 | 0.132 | 0.804 |
| Rv1432_day32 | 1.514 | 0.546 |
| Rv1565c_day32 | 0.286 | 0.1 |
| secA2_input | -0.291 | -0.365 |
| delta_Rv3594 | -0.427 | -0.207 |
| delta_Rv3717 | -0.205 | -0.042 |
| delta_Rv3811 | -0.346 | -0.581 |
| delta_Rv0954 | -0.275 | -0.412 |
| PonA1 | -0.441 | -0.294 |
| EccD1_KO | -0.145 | -0.145 |
| EspI_KO | -0.465 | -0.391 |
| PE35_KO | -0.23 | -0.977 |
| PPE68_KO | -0.221 | -0.95 |
| glycerol2 | 0.907 | 0.923 |
| lignocerate | 0.6 | 0.94 |
| oleate | 0.818 | 0.176 |
| phosphatidylcholine | 0.605 | 0.951 |
| acetate | 0.038 | 0.397 |
| glucAc | 0.0 | 0.288 |
| Rv0950ko | 0.317 | 0.57 |
| Rv1096ko | 0.015 | 0.461 |
| Rv3684ko | -0.046 | -0.449 |
| delta_otsA_trehalose | 1.375 | 1.436 |