Top 10 genes with highest correlation to Rv3532/PPE61:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0166/fadD5 | (cc=0.624) | info on Rv0166/fadD5 |
| Rv2771c/- | (cc=0.5901) | info on Rv2771c/- |
| Rv2063A/mazF7 | (cc=0.5374) | info on Rv2063A/mazF7 |
| Rv0103c/ctpB | (cc=0.5366) | info on Rv0103c/ctpB |
| Rv3288c/usfY | (cc=0.5352) | info on Rv3288c/usfY |
| Rv2351c/plcA | (cc=0.5258) | info on Rv2351c/plcA |
| Rv1882c/- | (cc=0.5246) | info on Rv1882c/- |
| Rv1249c/- | (cc=0.5202) | info on Rv1249c/- |
| Rv3367/PE_PGRS51 | (cc=0.4921) | info on Rv3367/PE_PGRS51 |
| Rv0604/lpqO | (cc=0.4866) | info on Rv0604/lpqO |
Correlation of Rv3532/PPE61 with Rv0604/lpqO
Normalized LFCs for Rv3532/PPE61:
(description and provenance of datasets)
| Rv3532/PPE61 | Rv0604/lpqO | |
| Fe_supp_jason_reseq | -0.058 | 1.159 |
| low_pH_jason_reseq | -0.79 | -1.474 |
| NO_jason_reseq | -0.194 | -2.195 |
| B6_jason_reseq | 0.706 | 0.798 |
| MHCII_jason_reseq | 0.622 | 1.287 |
| Isoniazid02 | 0.501 | 0.038 |
| Rifampicin4 | 0.019 | 0.347 |
| Ethambutol3 | 0.798 | -0.17 |
| Meropenem3 | 0.187 | 0.048 |
| Vancomycin16 | 0.204 | 0.0 |
| Rv2680_day32 | -0.116 | -0.525 |
| H37Rv_KO_MarP | 0.203 | 0.116 |
| hypoxia_3wks | 0.096 | 0.53 |
| hypoxia_6wks | -0.129 | -0.507 |
| glycerol | 0.334 | 1.27 |
| cholesterol | 0.284 | 0.077 |
| AJ | 0.05 | 0.729 |
| Bibs02 | 0.313 | 1.249 |
| Bibs02c | 0.371 | 0.896 |
| BL6 | 0.12 | 0.144 |
| BL6a | -0.014 | 0.027 |
| BXD01 | -0.209 | 0.39 |
| BXD010 | -0.409 | -0.118 |
| BXD011 | 0.005 | -0.94 |
| BXD03 | 0.054 | -0.115 |
| BXD04 | -0.004 | -1.037 |
| BXD05 | 0.371 | 0.089 |
| BXD06 | -0.348 | -0.78 |
| BXD07 | -0.241 | -0.46 |
| BXD08 | -0.537 | 0.509 |
| BXD09 | -0.257 | -0.416 |
| CAST | 0.452 | -0.112 |
| CCcont | -0.011 | 0.098 |
| DS01 | 0.435 | 0.731 |
| DS02 | 0.317 | 0.684 |
| DS04 | 0.357 | 0.839 |
| DS0c | 0.731 | 0.404 |
| GP01 | 0.479 | 0.0 |
| GP02 | 0.504 | -0.262 |
| GP0c | -0.254 | -0.101 |
| NOD | 0.049 | -0.921 |
| NZO | 0.238 | 0.118 |
| PWK | 0.267 | -0.124 |
| H37Rv_KO_CtpC | 0.344 | -1.291 |
| H37Rv_KO_CtpD | 0.176 | -0.532 |
| H37Rv_KO_Rv1272 | 0.169 | -1.06 |
| H37Rv_KO_SugABC | 0.239 | -1.802 |
| H37Rv_KO_MbtN | -0.361 | -0.819 |
| Trans05 | -0.31 | 0.462 |
| macrophage_unactivated | -0.417 | 1.18 |
| IL1 | -0.427 | 0.027 |
| Rapamycin | -0.282 | -0.792 |
| Tcell | -0.156 | -0.274 |
| GMCSF | -0.259 | 0.14 |
| IFNab | 0.203 | -0.342 |
| IFNg | -0.086 | -1.085 |
| IFNg_GMCSF1 | 0.132 | 2.124 |
| Rv1432_day32 | 1.514 | 1.395 |
| Rv1565c_day32 | 0.286 | 1.058 |
| secA2_input | -0.291 | -0.221 |
| delta_Rv3594 | -0.427 | -0.857 |
| delta_Rv3717 | -0.205 | -1.05 |
| delta_Rv3811 | -0.346 | -1.689 |
| delta_Rv0954 | -0.275 | -0.724 |
| PonA1 | -0.441 | -2.328 |
| EccD1_KO | -0.145 | 0.506 |
| EspI_KO | -0.465 | -0.24 |
| PE35_KO | -0.23 | 0.175 |
| PPE68_KO | -0.221 | 0.637 |
| glycerol2 | 0.907 | 0.726 |
| lignocerate | 0.6 | 1.142 |
| oleate | 0.818 | 1.353 |
| phosphatidylcholine | 0.605 | 1.452 |
| acetate | 0.038 | 0.843 |
| glucAc | 0.0 | 0.631 |
| Rv0950ko | 0.317 | 0.799 |
| Rv1096ko | 0.015 | 0.124 |
| Rv3684ko | -0.046 | 0.665 |
| delta_otsA_trehalose | 1.375 | 1.318 |