Top 10 genes with highest correlation to Rv3527/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0822c/- | (cc=0.5028) | info on Rv0822c/- |
| Rv1931c/- | (cc=0.496) | info on Rv1931c/- |
| Rv0805/- | (cc=0.4792) | info on Rv0805/- |
| Rv3126c/- | (cc=0.4772) | info on Rv3126c/- |
| Rv2211c/gcvT | (cc=0.4745) | info on Rv2211c/gcvT |
| Rv2389c/rpfD | (cc=0.4624) | info on Rv2389c/rpfD |
| Rv0388c/PPE9 | (cc=0.449) | info on Rv0388c/PPE9 |
| Rv2543/lppA | (cc=0.448) | info on Rv2543/lppA |
| Rv0371c/- | (cc=0.4478) | info on Rv0371c/- |
| Rv3398c/idsA1 | (cc=0.4451) | info on Rv3398c/idsA1 |
Correlation of Rv3527/- with Rv0805/-
Normalized LFCs for Rv3527/-:
(description and provenance of datasets)
| Rv3527/- | Rv0805/- | |
| Fe_supp_jason_reseq | -0.24 | -0.609 |
| low_pH_jason_reseq | -1.989 | 2.615 |
| NO_jason_reseq | -1.352 | -3.686 |
| B6_jason_reseq | -2.055 | -1.743 |
| MHCII_jason_reseq | -1.933 | -3.887 |
| Isoniazid02 | -0.239 | 1.139 |
| Rifampicin4 | 0.812 | -2.534 |
| Ethambutol3 | 0.275 | -0.993 |
| Meropenem3 | 0.423 | -0.847 |
| Vancomycin16 | 0.745 | -0.034 |
| Rv2680_day32 | 1.206 | 1.826 |
| H37Rv_KO_MarP | -0.693 | -1.515 |
| hypoxia_3wks | -0.494 | -0.215 |
| hypoxia_6wks | -0.319 | -2.249 |
| glycerol | 0.505 | 1.701 |
| cholesterol | -1.583 | -0.676 |
| AJ | 0.249 | 2.04 |
| Bibs02 | -0.909 | -0.159 |
| Bibs02c | 1.805 | 1.082 |
| BL6 | -0.231 | 0.439 |
| BL6a | 2.069 | 3.122 |
| BXD01 | -0.455 | 6.0 |
| BXD010 | 0.306 | 3.308 |
| BXD011 | 1.804 | 2.293 |
| BXD03 | 1.376 | 3.901 |
| BXD04 | 0.796 | 5.495 |
| BXD05 | 0.306 | 2.33 |
| BXD06 | 0.377 | 4.573 |
| BXD07 | 1.06 | 3.297 |
| BXD08 | 0.551 | 2.623 |
| BXD09 | 1.178 | 3.807 |
| CAST | 0.277 | 1.468 |
| CCcont | -0.109 | 3.702 |
| DS01 | 0.033 | 2.962 |
| DS02 | -0.032 | 1.011 |
| DS04 | 1.525 | 0.5 |
| DS0c | 0.204 | 3.685 |
| GP01 | -1.967 | -0.946 |
| GP02 | -1.658 | -0.568 |
| GP0c | -2.081 | -1.245 |
| NOD | 0.866 | 0.983 |
| NZO | 0.883 | 2.932 |
| PWK | -0.465 | -0.261 |
| H37Rv_KO_CtpC | 0.97 | -0.758 |
| H37Rv_KO_CtpD | 0.303 | 1.382 |
| H37Rv_KO_Rv1272 | -0.285 | 0.454 |
| H37Rv_KO_SugABC | -1.355 | 0.041 |
| H37Rv_KO_MbtN | -1.41 | 0.809 |
| Trans05 | -0.841 | 1.482 |
| macrophage_unactivated | -0.054 | 0.884 |
| IL1 | -0.178 | -2.669 |
| Rapamycin | 0.859 | -0.5 |
| Tcell | 0.081 | -1.352 |
| GMCSF | -0.203 | -1.096 |
| IFNab | 0.886 | 0.302 |
| IFNg | 0.131 | -2.157 |
| IFNg_GMCSF1 | 0.518 | -1.524 |
| Rv1432_day32 | -0.356 | -1.036 |
| Rv1565c_day32 | -1.579 | -1.848 |
| secA2_input | -1.293 | -0.479 |
| delta_Rv3594 | -2.424 | -2.756 |
| delta_Rv3717 | -0.856 | -4.43 |
| delta_Rv3811 | -3.15 | -3.096 |
| delta_Rv0954 | -2.507 | -1.676 |
| PonA1 | -1.009 | -0.617 |
| EccD1_KO | -0.299 | -1.46 |
| EspI_KO | 1.691 | -1.155 |
| PE35_KO | 0.181 | 0.589 |
| PPE68_KO | -0.042 | -0.211 |
| glycerol2 | -1.871 | -0.916 |
| lignocerate | -1.626 | -0.23 |
| oleate | -1.095 | 1.015 |
| phosphatidylcholine | -2.451 | -1.752 |
| acetate | -1.006 | 0.121 |
| glucAc | -1.764 | -0.146 |
| Rv0950ko | 0.82 | 0.187 |
| Rv1096ko | -0.124 | -1.004 |
| Rv3684ko | 0.586 | -0.298 |
| delta_otsA_trehalose | 0.722 | 1.785 |