Top 10 genes with highest correlation to Rv3511/PE_PGRS55:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0834c/PE_PGRS14 | (cc=0.7185) | info on Rv0834c/PE_PGRS14 |
| Rv3508/PE_PGRS54 | (cc=0.6409) | info on Rv3508/PE_PGRS54 |
| Rv3512/PE_PGRS56 | (cc=0.5701) | info on Rv3512/PE_PGRS56 |
| Rv0235c/- | (cc=0.5471) | info on Rv0235c/- |
| Rv3514/PE_PGRS57 | (cc=0.5468) | info on Rv3514/PE_PGRS57 |
| Rv3345c/PE_PGRS50 | (cc=0.5418) | info on Rv3345c/PE_PGRS50 |
| Rv1891/- | (cc=0.5372) | info on Rv1891/- |
| Rv0833/PE_PGRS13 | (cc=0.5355) | info on Rv0833/PE_PGRS13 |
| Rv3394c/- | (cc=0.5008) | info on Rv3394c/- |
| Rv0354c/PPE7 | (cc=0.5006) | info on Rv0354c/PPE7 |
Correlation of Rv3511/PE_PGRS55 with Rv3512/PE_PGRS56
Normalized LFCs for Rv3511/PE_PGRS55:
(description and provenance of datasets)
| Rv3511/PE_PGRS55 | Rv3512/PE_PGRS56 | |
| Fe_supp_jason_reseq | -0.718 | -0.587 |
| low_pH_jason_reseq | -0.269 | -1.091 |
| NO_jason_reseq | -0.278 | -0.176 |
| B6_jason_reseq | -0.682 | -0.322 |
| MHCII_jason_reseq | 0.111 | 0.123 |
| Isoniazid02 | -1.059 | -1.909 |
| Rifampicin4 | 0.444 | -0.647 |
| Ethambutol3 | -0.565 | -0.537 |
| Meropenem3 | -0.213 | -0.737 |
| Vancomycin16 | -0.348 | -0.963 |
| Rv2680_day32 | -0.922 | 0.529 |
| H37Rv_KO_MarP | 0.014 | 0.0 |
| hypoxia_3wks | -0.618 | -0.183 |
| hypoxia_6wks | -1.347 | -1.13 |
| glycerol | 0.686 | 1.981 |
| cholesterol | 0.429 | 1.209 |
| AJ | 0.844 | 2.276 |
| Bibs02 | -0.334 | 1.27 |
| Bibs02c | 0.685 | 1.576 |
| BL6 | -0.228 | 0.263 |
| BL6a | 0.321 | 0.914 |
| BXD01 | 0.31 | 0.695 |
| BXD010 | -0.196 | 1.102 |
| BXD011 | -0.297 | 0.49 |
| BXD03 | 1.067 | 0.573 |
| BXD04 | 0.287 | 0.859 |
| BXD05 | 0.589 | 0.764 |
| BXD06 | 0.178 | 0.075 |
| BXD07 | 0.41 | 0.291 |
| BXD08 | 0.632 | 0.341 |
| BXD09 | 0.287 | 0.36 |
| CAST | 0.075 | 0.484 |
| CCcont | -0.025 | 0.24 |
| DS01 | -0.866 | 0.38 |
| DS02 | -0.112 | 0.922 |
| DS04 | -0.083 | 0.11 |
| DS0c | -0.484 | -0.129 |
| GP01 | 0.579 | 0.561 |
| GP02 | 1.313 | 0.553 |
| GP0c | 0.699 | 0.738 |
| NOD | -0.322 | 0.0 |
| NZO | 1.052 | 1.326 |
| PWK | 0.374 | 0.674 |
| H37Rv_KO_CtpC | 0.561 | 0.261 |
| H37Rv_KO_CtpD | 0.302 | 0.584 |
| H37Rv_KO_Rv1272 | 0.058 | 1.177 |
| H37Rv_KO_SugABC | 0.649 | 0.381 |
| H37Rv_KO_MbtN | 0.319 | -0.271 |
| Trans05 | 1.249 | 1.157 |
| macrophage_unactivated | 0.073 | -0.537 |
| IL1 | -0.59 | -1.978 |
| Rapamycin | -0.611 | -1.795 |
| Tcell | -0.479 | -1.652 |
| GMCSF | 0.544 | -0.779 |
| IFNab | -0.683 | -2.283 |
| IFNg | -0.497 | -1.157 |
| IFNg_GMCSF1 | -0.421 | -0.349 |
| Rv1432_day32 | 1.036 | 0.252 |
| Rv1565c_day32 | -0.524 | -1.275 |
| secA2_input | 0.446 | 0.0 |
| delta_Rv3594 | -0.135 | 0.272 |
| delta_Rv3717 | -0.53 | -0.629 |
| delta_Rv3811 | -0.349 | -0.253 |
| delta_Rv0954 | -0.808 | -2.288 |
| PonA1 | 0.0 | 0.714 |
| EccD1_KO | 0.444 | 0.418 |
| EspI_KO | -0.225 | -0.451 |
| PE35_KO | -0.63 | -0.916 |
| PPE68_KO | -0.733 | -0.685 |
| glycerol2 | 0.248 | 0.109 |
| lignocerate | 0.342 | 0.505 |
| oleate | 0.166 | -0.515 |
| phosphatidylcholine | 0.221 | 0.0 |
| acetate | -0.057 | 1.225 |
| glucAc | -0.023 | 1.367 |
| Rv0950ko | 0.609 | -0.63 |
| Rv1096ko | 0.531 | 0.115 |
| Rv3684ko | -0.193 | -0.065 |
| delta_otsA_trehalose | -1.443 | 0.366 |