Top 10 genes with highest correlation to Rv3501c/yrbE4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3497c/mce4C | (cc=0.892) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.8667) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.857) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.8542) | info on Rv3498c/mce4B |
| Rv3499c/mce4A | (cc=0.8241) | info on Rv3499c/mce4A |
| Rv3494c/mce4F | (cc=0.815) | info on Rv3494c/mce4F |
| Rv3495c/lprN | (cc=0.8107) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7611) | info on Rv3492c/- |
| Rv2799/- | (cc=0.7332) | info on Rv2799/- |
| Rv0202c/mmpL11 | (cc=0.6938) | info on Rv0202c/mmpL11 |
Correlation of Rv3501c/yrbE4A with Rv3500c/yrbE4B
Normalized LFCs for Rv3501c/yrbE4A:
(description and provenance of datasets)
| Rv3501c/yrbE4A | Rv3500c/yrbE4B | |
| Fe_supp_jason_reseq | 1.012 | 0.041 |
| low_pH_jason_reseq | -0.326 | -0.982 |
| NO_jason_reseq | 0.58 | 0.562 |
| B6_jason_reseq | -1.279 | -1.459 |
| MHCII_jason_reseq | -2.391 | -2.141 |
| Isoniazid02 | 0.595 | 0.013 |
| Rifampicin4 | 0.628 | -0.038 |
| Ethambutol3 | 1.582 | 0.225 |
| Meropenem3 | 0.162 | -0.568 |
| Vancomycin16 | 0.806 | 0.533 |
| Rv2680_day32 | -2.546 | -2.969 |
| H37Rv_KO_MarP | 0.593 | 0.028 |
| hypoxia_3wks | 0.02 | 0.391 |
| hypoxia_6wks | 0.01 | 0.155 |
| glycerol | -0.724 | -2.465 |
| cholesterol | -3.897 | -4.573 |
| AJ | -3.578 | -3.361 |
| Bibs02 | -0.253 | -0.917 |
| Bibs02c | -1.17 | -1.103 |
| BL6 | 0.509 | -1.464 |
| BL6a | -0.839 | -1.852 |
| BXD01 | -0.422 | -1.302 |
| BXD010 | -0.514 | -0.174 |
| BXD011 | -0.475 | -0.948 |
| BXD03 | -0.332 | -1.828 |
| BXD04 | -0.478 | -1.196 |
| BXD05 | -0.148 | -0.647 |
| BXD06 | -0.545 | -1.092 |
| BXD07 | -0.526 | -1.748 |
| BXD08 | -0.534 | -1.596 |
| BXD09 | -0.544 | -1.394 |
| CAST | -3.056 | -2.544 |
| CCcont | 1.143 | -0.652 |
| DS01 | -1.906 | -3.247 |
| DS02 | -2.002 | -2.382 |
| DS04 | -1.834 | -2.534 |
| DS0c | -2.077 | -1.516 |
| GP01 | 0.999 | -0.082 |
| GP02 | 0.813 | -0.734 |
| GP0c | 0.702 | -0.408 |
| NOD | -1.181 | -2.673 |
| NZO | -2.647 | -2.114 |
| PWK | -2.404 | -2.316 |
| H37Rv_KO_CtpC | -1.477 | -1.028 |
| H37Rv_KO_CtpD | -0.385 | -0.447 |
| H37Rv_KO_Rv1272 | 0.593 | -0.852 |
| H37Rv_KO_SugABC | 0.685 | 0.509 |
| H37Rv_KO_MbtN | 1.06 | 0.869 |
| Trans05 | 0.019 | -0.127 |
| macrophage_unactivated | -1.061 | -0.619 |
| IL1 | 2.035 | 2.213 |
| Rapamycin | 1.847 | 2.059 |
| Tcell | -0.456 | 0.257 |
| GMCSF | -1.677 | -1.964 |
| IFNab | -1.871 | -2.08 |
| IFNg | -0.604 | -0.612 |
| IFNg_GMCSF1 | -0.635 | -1.049 |
| Rv1432_day32 | -2.587 | -2.967 |
| Rv1565c_day32 | -2.279 | -2.853 |
| secA2_input | -0.647 | -0.316 |
| delta_Rv3594 | 0.506 | -0.066 |
| delta_Rv3717 | -0.206 | -0.42 |
| delta_Rv3811 | 0.248 | -0.04 |
| delta_Rv0954 | -0.634 | -0.419 |
| PonA1 | 0.031 | 0.129 |
| EccD1_KO | -0.135 | 0.572 |
| EspI_KO | -0.405 | 0.088 |
| PE35_KO | -0.385 | -0.362 |
| PPE68_KO | -0.058 | -0.195 |
| glycerol2 | 0.118 | -0.412 |
| lignocerate | 1.43 | 0.546 |
| oleate | 0.726 | 1.51 |
| phosphatidylcholine | 0.22 | -0.01 |
| acetate | 0.959 | -0.288 |
| glucAc | 0.671 | 0.103 |
| Rv0950ko | 0.03 | 0.446 |
| Rv1096ko | 0.347 | 0.238 |
| Rv3684ko | 0.989 | 0.563 |
| delta_otsA_trehalose | 0.341 | 0.05 |