Top 10 genes with highest correlation to Rv3501c/yrbE4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3497c/mce4C | (cc=0.892) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.8667) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.857) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.8542) | info on Rv3498c/mce4B |
| Rv3499c/mce4A | (cc=0.8241) | info on Rv3499c/mce4A |
| Rv3494c/mce4F | (cc=0.815) | info on Rv3494c/mce4F |
| Rv3495c/lprN | (cc=0.8107) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7611) | info on Rv3492c/- |
| Rv2799/- | (cc=0.7332) | info on Rv2799/- |
| Rv0202c/mmpL11 | (cc=0.6938) | info on Rv0202c/mmpL11 |
Correlation of Rv3501c/yrbE4A with Rv3499c/mce4A
Normalized LFCs for Rv3501c/yrbE4A:
(description and provenance of datasets)
| Rv3501c/yrbE4A | Rv3499c/mce4A | |
| Fe_supp_jason_reseq | 1.012 | -0.054 |
| low_pH_jason_reseq | -0.326 | -0.44 |
| NO_jason_reseq | 0.58 | 0.252 |
| B6_jason_reseq | -1.279 | -1.731 |
| MHCII_jason_reseq | -2.391 | -2.073 |
| Isoniazid02 | 0.595 | -0.116 |
| Rifampicin4 | 0.628 | 0.382 |
| Ethambutol3 | 1.582 | -0.288 |
| Meropenem3 | 0.162 | -0.979 |
| Vancomycin16 | 0.806 | 0.101 |
| Rv2680_day32 | -2.546 | -2.57 |
| H37Rv_KO_MarP | 0.593 | 0.435 |
| hypoxia_3wks | 0.02 | 0.148 |
| hypoxia_6wks | 0.01 | 0.418 |
| glycerol | -0.724 | -0.295 |
| cholesterol | -3.897 | -2.911 |
| AJ | -3.578 | -3.047 |
| Bibs02 | -0.253 | -1.714 |
| Bibs02c | -1.17 | -0.552 |
| BL6 | 0.509 | -0.317 |
| BL6a | -0.839 | -1.032 |
| BXD01 | -0.422 | -0.713 |
| BXD010 | -0.514 | -0.434 |
| BXD011 | -0.475 | -0.446 |
| BXD03 | -0.332 | -1.14 |
| BXD04 | -0.478 | -0.957 |
| BXD05 | -0.148 | -0.426 |
| BXD06 | -0.545 | -0.924 |
| BXD07 | -0.526 | -0.836 |
| BXD08 | -0.534 | -1.444 |
| BXD09 | -0.544 | -0.952 |
| CAST | -3.056 | -1.984 |
| CCcont | 1.143 | 0.171 |
| DS01 | -1.906 | -2.459 |
| DS02 | -2.002 | -1.473 |
| DS04 | -1.834 | -1.897 |
| DS0c | -2.077 | -1.469 |
| GP01 | 0.999 | -0.764 |
| GP02 | 0.813 | -1.116 |
| GP0c | 0.702 | 0.239 |
| NOD | -1.181 | -1.17 |
| NZO | -2.647 | -2.212 |
| PWK | -2.404 | -1.518 |
| H37Rv_KO_CtpC | -1.477 | -0.867 |
| H37Rv_KO_CtpD | -0.385 | -0.487 |
| H37Rv_KO_Rv1272 | 0.593 | 0.802 |
| H37Rv_KO_SugABC | 0.685 | 0.69 |
| H37Rv_KO_MbtN | 1.06 | 0.596 |
| Trans05 | 0.019 | -0.133 |
| macrophage_unactivated | -1.061 | -1.196 |
| IL1 | 2.035 | 2.236 |
| Rapamycin | 1.847 | 2.065 |
| Tcell | -0.456 | -0.323 |
| GMCSF | -1.677 | -1.325 |
| IFNab | -1.871 | -1.496 |
| IFNg | -0.604 | -0.575 |
| IFNg_GMCSF1 | -0.635 | -1.596 |
| Rv1432_day32 | -2.587 | -3.85 |
| Rv1565c_day32 | -2.279 | -2.132 |
| secA2_input | -0.647 | -0.557 |
| delta_Rv3594 | 0.506 | 0.133 |
| delta_Rv3717 | -0.206 | -0.184 |
| delta_Rv3811 | 0.248 | 0.184 |
| delta_Rv0954 | -0.634 | 0.136 |
| PonA1 | 0.031 | -0.169 |
| EccD1_KO | -0.135 | 0.845 |
| EspI_KO | -0.405 | 1.306 |
| PE35_KO | -0.385 | 0.327 |
| PPE68_KO | -0.058 | 0.71 |
| glycerol2 | 0.118 | -0.614 |
| lignocerate | 1.43 | 0.259 |
| oleate | 0.726 | 0.637 |
| phosphatidylcholine | 0.22 | -0.427 |
| acetate | 0.959 | -0.484 |
| glucAc | 0.671 | -0.501 |
| Rv0950ko | 0.03 | 0.115 |
| Rv1096ko | 0.347 | 0.069 |
| Rv3684ko | 0.989 | -0.075 |
| delta_otsA_trehalose | 0.341 | 0.179 |