Top 10 genes with highest correlation to Rv3501c/yrbE4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3497c/mce4C | (cc=0.892) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.8667) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.857) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.8542) | info on Rv3498c/mce4B |
| Rv3499c/mce4A | (cc=0.8241) | info on Rv3499c/mce4A |
| Rv3494c/mce4F | (cc=0.815) | info on Rv3494c/mce4F |
| Rv3495c/lprN | (cc=0.8107) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7611) | info on Rv3492c/- |
| Rv2799/- | (cc=0.7332) | info on Rv2799/- |
| Rv0202c/mmpL11 | (cc=0.6938) | info on Rv0202c/mmpL11 |
Correlation of Rv3501c/yrbE4A with Rv3492c/-
Normalized LFCs for Rv3501c/yrbE4A:
(description and provenance of datasets)
| Rv3501c/yrbE4A | Rv3492c/- | |
| Fe_supp_jason_reseq | 1.012 | 1.28 |
| low_pH_jason_reseq | -0.326 | 0.02 |
| NO_jason_reseq | 0.58 | -0.336 |
| B6_jason_reseq | -1.279 | -2.485 |
| MHCII_jason_reseq | -2.391 | -2.817 |
| Isoniazid02 | 0.595 | 0.308 |
| Rifampicin4 | 0.628 | 0.333 |
| Ethambutol3 | 1.582 | 0.303 |
| Meropenem3 | 0.162 | 0.084 |
| Vancomycin16 | 0.806 | 0.846 |
| Rv2680_day32 | -2.546 | -1.861 |
| H37Rv_KO_MarP | 0.593 | -0.185 |
| hypoxia_3wks | 0.02 | -0.367 |
| hypoxia_6wks | 0.01 | 0.487 |
| glycerol | -0.724 | -1.802 |
| cholesterol | -3.897 | -3.5 |
| AJ | -3.578 | -2.64 |
| Bibs02 | -0.253 | -3.192 |
| Bibs02c | -1.17 | -0.227 |
| BL6 | 0.509 | -0.795 |
| BL6a | -0.839 | -1.078 |
| BXD01 | -0.422 | -2.075 |
| BXD010 | -0.514 | 0.986 |
| BXD011 | -0.475 | -0.738 |
| BXD03 | -0.332 | -0.834 |
| BXD04 | -0.478 | -0.589 |
| BXD05 | -0.148 | -0.243 |
| BXD06 | -0.545 | -1.068 |
| BXD07 | -0.526 | -1.857 |
| BXD08 | -0.534 | -2.119 |
| BXD09 | -0.544 | -1.187 |
| CAST | -3.056 | -2.766 |
| CCcont | 1.143 | 0.32 |
| DS01 | -1.906 | -2.479 |
| DS02 | -2.002 | -2.163 |
| DS04 | -1.834 | -1.779 |
| DS0c | -2.077 | -2.157 |
| GP01 | 0.999 | -1.219 |
| GP02 | 0.813 | -0.805 |
| GP0c | 0.702 | 0.2 |
| NOD | -1.181 | -1.897 |
| NZO | -2.647 | -2.91 |
| PWK | -2.404 | -1.209 |
| H37Rv_KO_CtpC | -1.477 | -0.801 |
| H37Rv_KO_CtpD | -0.385 | -0.04 |
| H37Rv_KO_Rv1272 | 0.593 | 0.438 |
| H37Rv_KO_SugABC | 0.685 | -1.292 |
| H37Rv_KO_MbtN | 1.06 | 1.725 |
| Trans05 | 0.019 | -0.113 |
| macrophage_unactivated | -1.061 | -2.415 |
| IL1 | 2.035 | 2.308 |
| Rapamycin | 1.847 | 1.114 |
| Tcell | -0.456 | -1.515 |
| GMCSF | -1.677 | -2.881 |
| IFNab | -1.871 | -2.165 |
| IFNg | -0.604 | -1.205 |
| IFNg_GMCSF1 | -0.635 | -1.769 |
| Rv1432_day32 | -2.587 | -2.847 |
| Rv1565c_day32 | -2.279 | -3.183 |
| secA2_input | -0.647 | 0.172 |
| delta_Rv3594 | 0.506 | -0.806 |
| delta_Rv3717 | -0.206 | -1.524 |
| delta_Rv3811 | 0.248 | -2.003 |
| delta_Rv0954 | -0.634 | -0.221 |
| PonA1 | 0.031 | -1.575 |
| EccD1_KO | -0.135 | 0.516 |
| EspI_KO | -0.405 | 0.625 |
| PE35_KO | -0.385 | 0.233 |
| PPE68_KO | -0.058 | 0.733 |
| glycerol2 | 0.118 | -0.09 |
| lignocerate | 1.43 | 0.608 |
| oleate | 0.726 | 0.77 |
| phosphatidylcholine | 0.22 | -0.283 |
| acetate | 0.959 | -0.725 |
| glucAc | 0.671 | 0.516 |
| Rv0950ko | 0.03 | 0.654 |
| Rv1096ko | 0.347 | 1.224 |
| Rv3684ko | 0.989 | -0.079 |
| delta_otsA_trehalose | 0.341 | -0.351 |