Top 10 genes with highest correlation to Rv3501c/yrbE4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3497c/mce4C | (cc=0.892) | info on Rv3497c/mce4C |
| Rv3500c/yrbE4B | (cc=0.8667) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.857) | info on Rv3496c/mce4D |
| Rv3498c/mce4B | (cc=0.8542) | info on Rv3498c/mce4B |
| Rv3499c/mce4A | (cc=0.8241) | info on Rv3499c/mce4A |
| Rv3494c/mce4F | (cc=0.815) | info on Rv3494c/mce4F |
| Rv3495c/lprN | (cc=0.8107) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7611) | info on Rv3492c/- |
| Rv2799/- | (cc=0.7332) | info on Rv2799/- |
| Rv0202c/mmpL11 | (cc=0.6938) | info on Rv0202c/mmpL11 |
Correlation of Rv3501c/yrbE4A with Rv0202c/mmpL11
Normalized LFCs for Rv3501c/yrbE4A:
(description and provenance of datasets)
| Rv3501c/yrbE4A | Rv0202c/mmpL11 | |
| Fe_supp_jason_reseq | 1.012 | 1.55 |
| low_pH_jason_reseq | -0.326 | 1.104 |
| NO_jason_reseq | 0.58 | -3.639 |
| B6_jason_reseq | -1.279 | -1.212 |
| MHCII_jason_reseq | -2.391 | -0.797 |
| Isoniazid02 | 0.595 | 0.333 |
| Rifampicin4 | 0.628 | -0.915 |
| Ethambutol3 | 1.582 | 1.156 |
| Meropenem3 | 0.162 | 0.328 |
| Vancomycin16 | 0.806 | 2.709 |
| Rv2680_day32 | -2.546 | -1.836 |
| H37Rv_KO_MarP | 0.593 | -0.086 |
| hypoxia_3wks | 0.02 | -0.494 |
| hypoxia_6wks | 0.01 | -0.455 |
| glycerol | -0.724 | -1.701 |
| cholesterol | -3.897 | -2.481 |
| AJ | -3.578 | -2.294 |
| Bibs02 | -0.253 | -0.323 |
| Bibs02c | -1.17 | -0.784 |
| BL6 | 0.509 | -0.468 |
| BL6a | -0.839 | -1.19 |
| BXD01 | -0.422 | -0.984 |
| BXD010 | -0.514 | -0.498 |
| BXD011 | -0.475 | -1.073 |
| BXD03 | -0.332 | -1.05 |
| BXD04 | -0.478 | -1.129 |
| BXD05 | -0.148 | -0.626 |
| BXD06 | -0.545 | -0.85 |
| BXD07 | -0.526 | -1.105 |
| BXD08 | -0.534 | -1.28 |
| BXD09 | -0.544 | -1.062 |
| CAST | -3.056 | -1.94 |
| CCcont | 1.143 | 1.028 |
| DS01 | -1.906 | -2.335 |
| DS02 | -2.002 | -2.327 |
| DS04 | -1.834 | -1.31 |
| DS0c | -2.077 | -0.574 |
| GP01 | 0.999 | 0.979 |
| GP02 | 0.813 | 0.235 |
| GP0c | 0.702 | 0.173 |
| NOD | -1.181 | -1.23 |
| NZO | -2.647 | -1.425 |
| PWK | -2.404 | -1.401 |
| H37Rv_KO_CtpC | -1.477 | -0.472 |
| H37Rv_KO_CtpD | -0.385 | -0.403 |
| H37Rv_KO_Rv1272 | 0.593 | 0.014 |
| H37Rv_KO_SugABC | 0.685 | -0.835 |
| H37Rv_KO_MbtN | 1.06 | 0.467 |
| Trans05 | 0.019 | -0.398 |
| macrophage_unactivated | -1.061 | -1.938 |
| IL1 | 2.035 | 2.225 |
| Rapamycin | 1.847 | 1.504 |
| Tcell | -0.456 | -0.166 |
| GMCSF | -1.677 | -2.799 |
| IFNab | -1.871 | -0.68 |
| IFNg | -0.604 | -0.845 |
| IFNg_GMCSF1 | -0.635 | -1.621 |
| Rv1432_day32 | -2.587 | -1.996 |
| Rv1565c_day32 | -2.279 | -2.154 |
| secA2_input | -0.647 | -0.463 |
| delta_Rv3594 | 0.506 | 0.356 |
| delta_Rv3717 | -0.206 | 0.432 |
| delta_Rv3811 | 0.248 | 0.241 |
| delta_Rv0954 | -0.634 | -0.402 |
| PonA1 | 0.031 | 0.53 |
| EccD1_KO | -0.135 | -1.181 |
| EspI_KO | -0.405 | -1.7 |
| PE35_KO | -0.385 | -0.805 |
| PPE68_KO | -0.058 | -1.12 |
| glycerol2 | 0.118 | -1.477 |
| lignocerate | 1.43 | -0.919 |
| oleate | 0.726 | 0.074 |
| phosphatidylcholine | 0.22 | -1.057 |
| acetate | 0.959 | 0.943 |
| glucAc | 0.671 | 0.106 |
| Rv0950ko | 0.03 | 0.202 |
| Rv1096ko | 0.347 | -0.106 |
| Rv3684ko | 0.989 | 0.219 |
| delta_otsA_trehalose | 0.341 | 0.223 |