Top 10 genes with highest correlation to Rv3499c/mce4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3498c/mce4B | (cc=0.8788) | info on Rv3498c/mce4B |
| Rv3494c/mce4F | (cc=0.8785) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8739) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8517) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.8481) | info on Rv3496c/mce4D |
| Rv3501c/yrbE4A | (cc=0.8241) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8208) | info on Rv3497c/mce4C |
| Rv3492c/- | (cc=0.8119) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.737) | info on Rv0381c/- |
| Rv2799/- | (cc=0.7173) | info on Rv2799/- |
Correlation of Rv3499c/mce4A with Rv3497c/mce4C
Normalized LFCs for Rv3499c/mce4A:
(description and provenance of datasets)
| Rv3499c/mce4A | Rv3497c/mce4C | |
| Fe_supp_jason_reseq | -0.054 | 0.695 |
| low_pH_jason_reseq | -0.44 | -0.423 |
| NO_jason_reseq | 0.252 | 0.257 |
| B6_jason_reseq | -1.731 | -0.97 |
| MHCII_jason_reseq | -2.073 | -2.025 |
| Isoniazid02 | -0.116 | 0.888 |
| Rifampicin4 | 0.382 | 0.704 |
| Ethambutol3 | -0.288 | 0.664 |
| Meropenem3 | -0.979 | -0.497 |
| Vancomycin16 | 0.101 | 0.472 |
| Rv2680_day32 | -2.57 | -1.164 |
| H37Rv_KO_MarP | 0.435 | 0.82 |
| hypoxia_3wks | 0.148 | 0.06 |
| hypoxia_6wks | 0.418 | 0.397 |
| glycerol | -0.295 | -0.064 |
| cholesterol | -2.911 | -3.509 |
| AJ | -3.047 | -3.019 |
| Bibs02 | -1.714 | -0.754 |
| Bibs02c | -0.552 | -1.041 |
| BL6 | -0.317 | -0.337 |
| BL6a | -1.032 | -1.142 |
| BXD01 | -0.713 | 0.03 |
| BXD010 | -0.434 | -0.528 |
| BXD011 | -0.446 | -0.305 |
| BXD03 | -1.14 | -0.917 |
| BXD04 | -0.957 | -0.68 |
| BXD05 | -0.426 | -1.063 |
| BXD06 | -0.924 | -0.373 |
| BXD07 | -0.836 | -0.491 |
| BXD08 | -1.444 | -0.204 |
| BXD09 | -0.952 | -0.452 |
| CAST | -1.984 | -2.196 |
| CCcont | 0.171 | 1.003 |
| DS01 | -2.459 | -2.827 |
| DS02 | -1.473 | -1.575 |
| DS04 | -1.897 | -1.775 |
| DS0c | -1.469 | -1.606 |
| GP01 | -0.764 | -0.34 |
| GP02 | -1.116 | -0.383 |
| GP0c | 0.239 | 0.436 |
| NOD | -1.17 | -2.327 |
| NZO | -2.212 | -1.902 |
| PWK | -1.518 | -1.795 |
| H37Rv_KO_CtpC | -0.867 | -1.426 |
| H37Rv_KO_CtpD | -0.487 | -1.208 |
| H37Rv_KO_Rv1272 | 0.802 | -1.373 |
| H37Rv_KO_SugABC | 0.69 | -0.108 |
| H37Rv_KO_MbtN | 0.596 | 0.166 |
| Trans05 | -0.133 | -0.224 |
| macrophage_unactivated | -1.196 | -0.978 |
| IL1 | 2.236 | 2.337 |
| Rapamycin | 2.065 | 1.749 |
| Tcell | -0.323 | 0.072 |
| GMCSF | -1.325 | -1.296 |
| IFNab | -1.496 | -1.917 |
| IFNg | -0.575 | -0.962 |
| IFNg_GMCSF1 | -1.596 | -0.641 |
| Rv1432_day32 | -3.85 | -2.405 |
| Rv1565c_day32 | -2.132 | -2.939 |
| secA2_input | -0.557 | -0.446 |
| delta_Rv3594 | 0.133 | -0.242 |
| delta_Rv3717 | -0.184 | -0.072 |
| delta_Rv3811 | 0.184 | -0.205 |
| delta_Rv0954 | 0.136 | -0.331 |
| PonA1 | -0.169 | -0.56 |
| EccD1_KO | 0.845 | 0.21 |
| EspI_KO | 1.306 | -0.094 |
| PE35_KO | 0.327 | -0.373 |
| PPE68_KO | 0.71 | -0.733 |
| glycerol2 | -0.614 | -0.057 |
| lignocerate | 0.259 | 1.076 |
| oleate | 0.637 | 1.181 |
| phosphatidylcholine | -0.427 | 0.0 |
| acetate | -0.484 | 0.033 |
| glucAc | -0.501 | 0.337 |
| Rv0950ko | 0.115 | -0.353 |
| Rv1096ko | 0.069 | 0.356 |
| Rv3684ko | -0.075 | 0.537 |
| delta_otsA_trehalose | 0.179 | -0.13 |