Top 10 genes with highest correlation to Rv3499c/mce4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3498c/mce4B | (cc=0.8788) | info on Rv3498c/mce4B |
| Rv3494c/mce4F | (cc=0.8785) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8739) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8517) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.8481) | info on Rv3496c/mce4D |
| Rv3501c/yrbE4A | (cc=0.8241) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8208) | info on Rv3497c/mce4C |
| Rv3492c/- | (cc=0.8119) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.737) | info on Rv0381c/- |
| Rv2799/- | (cc=0.7173) | info on Rv2799/- |
Correlation of Rv3499c/mce4A with Rv2799/-
Normalized LFCs for Rv3499c/mce4A:
(description and provenance of datasets)
| Rv3499c/mce4A | Rv2799/- | |
| Fe_supp_jason_reseq | -0.054 | 0.696 |
| low_pH_jason_reseq | -0.44 | -0.13 |
| NO_jason_reseq | 0.252 | -0.205 |
| B6_jason_reseq | -1.731 | -0.275 |
| MHCII_jason_reseq | -2.073 | -0.77 |
| Isoniazid02 | -0.116 | -0.745 |
| Rifampicin4 | 0.382 | 0.736 |
| Ethambutol3 | -0.288 | -0.575 |
| Meropenem3 | -0.979 | -1.399 |
| Vancomycin16 | 0.101 | 0.088 |
| Rv2680_day32 | -2.57 | -1.026 |
| H37Rv_KO_MarP | 0.435 | 0.573 |
| hypoxia_3wks | 0.148 | -0.191 |
| hypoxia_6wks | 0.418 | 0.098 |
| glycerol | -0.295 | -1.382 |
| cholesterol | -2.911 | -1.555 |
| AJ | -3.047 | -1.866 |
| Bibs02 | -1.714 | -0.041 |
| Bibs02c | -0.552 | -1.303 |
| BL6 | -0.317 | 0.665 |
| BL6a | -1.032 | -2.253 |
| BXD01 | -0.713 | -0.901 |
| BXD010 | -0.434 | -0.281 |
| BXD011 | -0.446 | -0.223 |
| BXD03 | -1.14 | -0.861 |
| BXD04 | -0.957 | 0.049 |
| BXD05 | -0.426 | -0.654 |
| BXD06 | -0.924 | -1.073 |
| BXD07 | -0.836 | -0.448 |
| BXD08 | -1.444 | -0.379 |
| BXD09 | -0.952 | -1.187 |
| CAST | -1.984 | -1.435 |
| CCcont | 0.171 | 0.76 |
| DS01 | -2.459 | -1.189 |
| DS02 | -1.473 | -1.341 |
| DS04 | -1.897 | -0.62 |
| DS0c | -1.469 | -0.66 |
| GP01 | -0.764 | 0.28 |
| GP02 | -1.116 | -0.444 |
| GP0c | 0.239 | 0.467 |
| NOD | -1.17 | -0.364 |
| NZO | -2.212 | -1.718 |
| PWK | -1.518 | -0.853 |
| H37Rv_KO_CtpC | -0.867 | -1.711 |
| H37Rv_KO_CtpD | -0.487 | -0.482 |
| H37Rv_KO_Rv1272 | 0.802 | 0.12 |
| H37Rv_KO_SugABC | 0.69 | 0.802 |
| H37Rv_KO_MbtN | 0.596 | 0.433 |
| Trans05 | -0.133 | 1.005 |
| macrophage_unactivated | -1.196 | -0.71 |
| IL1 | 2.236 | 1.996 |
| Rapamycin | 2.065 | 2.025 |
| Tcell | -0.323 | 0.378 |
| GMCSF | -1.325 | -0.853 |
| IFNab | -1.496 | -1.131 |
| IFNg | -0.575 | -0.633 |
| IFNg_GMCSF1 | -1.596 | -0.795 |
| Rv1432_day32 | -3.85 | -0.905 |
| Rv1565c_day32 | -2.132 | -0.697 |
| secA2_input | -0.557 | 0.445 |
| delta_Rv3594 | 0.133 | -0.317 |
| delta_Rv3717 | -0.184 | -0.379 |
| delta_Rv3811 | 0.184 | -0.573 |
| delta_Rv0954 | 0.136 | -0.439 |
| PonA1 | -0.169 | 0.419 |
| EccD1_KO | 0.845 | 0.756 |
| EspI_KO | 1.306 | 0.479 |
| PE35_KO | 0.327 | 0.0 |
| PPE68_KO | 0.71 | 0.314 |
| glycerol2 | -0.614 | -0.168 |
| lignocerate | 0.259 | 1.187 |
| oleate | 0.637 | -0.272 |
| phosphatidylcholine | -0.427 | 0.528 |
| acetate | -0.484 | 0.846 |
| glucAc | -0.501 | 0.661 |
| Rv0950ko | 0.115 | 0.401 |
| Rv1096ko | 0.069 | 0.253 |
| Rv3684ko | -0.075 | 0.478 |
| delta_otsA_trehalose | 0.179 | 1.111 |