Top 10 genes with highest correlation to Rv3499c/mce4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3498c/mce4B | (cc=0.8788) | info on Rv3498c/mce4B |
| Rv3494c/mce4F | (cc=0.8785) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8739) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8517) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.8481) | info on Rv3496c/mce4D |
| Rv3501c/yrbE4A | (cc=0.8241) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8208) | info on Rv3497c/mce4C |
| Rv3492c/- | (cc=0.8119) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.737) | info on Rv0381c/- |
| Rv2799/- | (cc=0.7173) | info on Rv2799/- |
Correlation of Rv3499c/mce4A with Rv3494c/mce4F
Normalized LFCs for Rv3499c/mce4A:
(description and provenance of datasets)
| Rv3499c/mce4A | Rv3494c/mce4F | |
| Fe_supp_jason_reseq | -0.054 | -0.073 |
| low_pH_jason_reseq | -0.44 | -0.733 |
| NO_jason_reseq | 0.252 | -0.142 |
| B6_jason_reseq | -1.731 | -1.135 |
| MHCII_jason_reseq | -2.073 | -2.433 |
| Isoniazid02 | -0.116 | -0.185 |
| Rifampicin4 | 0.382 | 0.441 |
| Ethambutol3 | -0.288 | 0.726 |
| Meropenem3 | -0.979 | -0.877 |
| Vancomycin16 | 0.101 | 0.056 |
| Rv2680_day32 | -2.57 | -2.426 |
| H37Rv_KO_MarP | 0.435 | 0.298 |
| hypoxia_3wks | 0.148 | 0.12 |
| hypoxia_6wks | 0.418 | 0.518 |
| glycerol | -0.295 | 0.654 |
| cholesterol | -2.911 | -4.127 |
| AJ | -3.047 | -2.158 |
| Bibs02 | -1.714 | -1.192 |
| Bibs02c | -0.552 | -1.884 |
| BL6 | -0.317 | -1.089 |
| BL6a | -1.032 | -1.459 |
| BXD01 | -0.713 | -1.097 |
| BXD010 | -0.434 | -0.806 |
| BXD011 | -0.446 | -1.349 |
| BXD03 | -1.14 | -0.963 |
| BXD04 | -0.957 | -1.114 |
| BXD05 | -0.426 | -0.942 |
| BXD06 | -0.924 | -1.436 |
| BXD07 | -0.836 | -0.722 |
| BXD08 | -1.444 | -1.577 |
| BXD09 | -0.952 | -1.587 |
| CAST | -1.984 | -1.817 |
| CCcont | 0.171 | 0.455 |
| DS01 | -2.459 | -3.092 |
| DS02 | -1.473 | -1.802 |
| DS04 | -1.897 | -1.663 |
| DS0c | -1.469 | -1.711 |
| GP01 | -0.764 | -0.667 |
| GP02 | -1.116 | -0.613 |
| GP0c | 0.239 | -0.033 |
| NOD | -1.17 | -0.638 |
| NZO | -2.212 | -1.124 |
| PWK | -1.518 | -2.18 |
| H37Rv_KO_CtpC | -0.867 | -1.414 |
| H37Rv_KO_CtpD | -0.487 | -1.553 |
| H37Rv_KO_Rv1272 | 0.802 | -0.036 |
| H37Rv_KO_SugABC | 0.69 | 0.288 |
| H37Rv_KO_MbtN | 0.596 | 0.285 |
| Trans05 | -0.133 | -0.722 |
| macrophage_unactivated | -1.196 | -1.24 |
| IL1 | 2.236 | 2.379 |
| Rapamycin | 2.065 | 2.032 |
| Tcell | -0.323 | -0.117 |
| GMCSF | -1.325 | -1.294 |
| IFNab | -1.496 | -1.796 |
| IFNg | -0.575 | -0.337 |
| IFNg_GMCSF1 | -1.596 | -1.367 |
| Rv1432_day32 | -3.85 | -2.716 |
| Rv1565c_day32 | -2.132 | -3.499 |
| secA2_input | -0.557 | 0.293 |
| delta_Rv3594 | 0.133 | -0.246 |
| delta_Rv3717 | -0.184 | -0.156 |
| delta_Rv3811 | 0.184 | -0.788 |
| delta_Rv0954 | 0.136 | -0.079 |
| PonA1 | -0.169 | -0.247 |
| EccD1_KO | 0.845 | 0.717 |
| EspI_KO | 1.306 | 0.519 |
| PE35_KO | 0.327 | 0.02 |
| PPE68_KO | 0.71 | 0.422 |
| glycerol2 | -0.614 | -0.891 |
| lignocerate | 0.259 | 0.253 |
| oleate | 0.637 | 0.159 |
| phosphatidylcholine | -0.427 | -1.021 |
| acetate | -0.484 | -0.216 |
| glucAc | -0.501 | -0.035 |
| Rv0950ko | 0.115 | 0.657 |
| Rv1096ko | 0.069 | 0.881 |
| Rv3684ko | -0.075 | 0.825 |
| delta_otsA_trehalose | 0.179 | 0.014 |