Top 10 genes with highest correlation to Rv3499c/mce4A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3498c/mce4B | (cc=0.8788) | info on Rv3498c/mce4B |
| Rv3494c/mce4F | (cc=0.8785) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8739) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8517) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.8481) | info on Rv3496c/mce4D |
| Rv3501c/yrbE4A | (cc=0.8241) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8208) | info on Rv3497c/mce4C |
| Rv3492c/- | (cc=0.8119) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.737) | info on Rv0381c/- |
| Rv2799/- | (cc=0.7173) | info on Rv2799/- |
Correlation of Rv3499c/mce4A with Rv3496c/mce4D
Normalized LFCs for Rv3499c/mce4A:
(description and provenance of datasets)
| Rv3499c/mce4A | Rv3496c/mce4D | |
| Fe_supp_jason_reseq | -0.054 | 0.036 |
| low_pH_jason_reseq | -0.44 | -0.773 |
| NO_jason_reseq | 0.252 | 0.404 |
| B6_jason_reseq | -1.731 | -1.98 |
| MHCII_jason_reseq | -2.073 | -2.258 |
| Isoniazid02 | -0.116 | 0.045 |
| Rifampicin4 | 0.382 | 0.225 |
| Ethambutol3 | -0.288 | 0.761 |
| Meropenem3 | -0.979 | -1.18 |
| Vancomycin16 | 0.101 | 0.446 |
| Rv2680_day32 | -2.57 | -2.31 |
| H37Rv_KO_MarP | 0.435 | 0.384 |
| hypoxia_3wks | 0.148 | 0.247 |
| hypoxia_6wks | 0.418 | 0.347 |
| glycerol | -0.295 | -0.243 |
| cholesterol | -2.911 | -3.912 |
| AJ | -3.047 | -3.652 |
| Bibs02 | -1.714 | -0.766 |
| Bibs02c | -0.552 | -1.02 |
| BL6 | -0.317 | -1.607 |
| BL6a | -1.032 | -1.435 |
| BXD01 | -0.713 | -1.196 |
| BXD010 | -0.434 | -0.499 |
| BXD011 | -0.446 | -1.314 |
| BXD03 | -1.14 | -0.769 |
| BXD04 | -0.957 | -1.792 |
| BXD05 | -0.426 | -0.949 |
| BXD06 | -0.924 | -1.076 |
| BXD07 | -0.836 | -0.898 |
| BXD08 | -1.444 | -1.059 |
| BXD09 | -0.952 | -1.258 |
| CAST | -1.984 | -2.81 |
| CCcont | 0.171 | -0.439 |
| DS01 | -2.459 | -2.881 |
| DS02 | -1.473 | -1.824 |
| DS04 | -1.897 | -2.773 |
| DS0c | -1.469 | -2.073 |
| GP01 | -0.764 | -0.421 |
| GP02 | -1.116 | -0.611 |
| GP0c | 0.239 | -0.039 |
| NOD | -1.17 | -2.602 |
| NZO | -2.212 | -2.465 |
| PWK | -1.518 | -2.693 |
| H37Rv_KO_CtpC | -0.867 | -1.81 |
| H37Rv_KO_CtpD | -0.487 | -0.753 |
| H37Rv_KO_Rv1272 | 0.802 | -0.326 |
| H37Rv_KO_SugABC | 0.69 | 0.223 |
| H37Rv_KO_MbtN | 0.596 | 1.117 |
| Trans05 | -0.133 | -0.627 |
| macrophage_unactivated | -1.196 | -1.417 |
| IL1 | 2.236 | 1.969 |
| Rapamycin | 2.065 | 1.608 |
| Tcell | -0.323 | -0.375 |
| GMCSF | -1.325 | -1.798 |
| IFNab | -1.496 | -1.726 |
| IFNg | -0.575 | -0.959 |
| IFNg_GMCSF1 | -1.596 | -1.694 |
| Rv1432_day32 | -3.85 | -0.941 |
| Rv1565c_day32 | -2.132 | -2.286 |
| secA2_input | -0.557 | 0.014 |
| delta_Rv3594 | 0.133 | -0.5 |
| delta_Rv3717 | -0.184 | -0.242 |
| delta_Rv3811 | 0.184 | -0.449 |
| delta_Rv0954 | 0.136 | -0.017 |
| PonA1 | -0.169 | -0.07 |
| EccD1_KO | 0.845 | 0.516 |
| EspI_KO | 1.306 | 0.322 |
| PE35_KO | 0.327 | -0.403 |
| PPE68_KO | 0.71 | 0.301 |
| glycerol2 | -0.614 | -0.729 |
| lignocerate | 0.259 | 0.337 |
| oleate | 0.637 | 0.7 |
| phosphatidylcholine | -0.427 | -0.535 |
| acetate | -0.484 | -0.175 |
| glucAc | -0.501 | -0.569 |
| Rv0950ko | 0.115 | 0.642 |
| Rv1096ko | 0.069 | 1.33 |
| Rv3684ko | -0.075 | 1.14 |
| delta_otsA_trehalose | 0.179 | 0.795 |