Top 10 genes with highest correlation to Rv3498c/mce4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3499c/mce4A | (cc=0.8788) | info on Rv3499c/mce4A |
| Rv3501c/yrbE4A | (cc=0.8542) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8492) | info on Rv3497c/mce4C |
| Rv3496c/mce4D | (cc=0.8454) | info on Rv3496c/mce4D |
| Rv3494c/mce4F | (cc=0.8432) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8343) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8092) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7439) | info on Rv3492c/- |
| Rv3723/- | (cc=0.7202) | info on Rv3723/- |
| Rv0199/- | (cc=0.7183) | info on Rv0199/- |
Correlation of Rv3498c/mce4B with Rv3501c/yrbE4A
Normalized LFCs for Rv3498c/mce4B:
(description and provenance of datasets)
| Rv3498c/mce4B | Rv3501c/yrbE4A | |
| Fe_supp_jason_reseq | 0.104 | 1.012 |
| low_pH_jason_reseq | 0.758 | -0.326 |
| NO_jason_reseq | 0.026 | 0.58 |
| B6_jason_reseq | -2.414 | -1.279 |
| MHCII_jason_reseq | -3.285 | -2.391 |
| Isoniazid02 | -0.307 | 0.595 |
| Rifampicin4 | 0.33 | 0.628 |
| Ethambutol3 | 0.236 | 1.582 |
| Meropenem3 | -0.93 | 0.162 |
| Vancomycin16 | 0.236 | 0.806 |
| Rv2680_day32 | -2.748 | -2.546 |
| H37Rv_KO_MarP | 0.864 | 0.593 |
| hypoxia_3wks | 0.518 | 0.02 |
| hypoxia_6wks | 0.34 | 0.01 |
| glycerol | -0.287 | -0.724 |
| cholesterol | -3.124 | -3.897 |
| AJ | -4.02 | -3.578 |
| Bibs02 | -0.621 | -0.253 |
| Bibs02c | -2.621 | -1.17 |
| BL6 | -0.086 | 0.509 |
| BL6a | -1.158 | -0.839 |
| BXD01 | -0.536 | -0.422 |
| BXD010 | -0.309 | -0.514 |
| BXD011 | -0.307 | -0.475 |
| BXD03 | -1.587 | -0.332 |
| BXD04 | -0.816 | -0.478 |
| BXD05 | -0.27 | -0.148 |
| BXD06 | -0.669 | -0.545 |
| BXD07 | 0.525 | -0.526 |
| BXD08 | -0.422 | -0.534 |
| BXD09 | -0.704 | -0.544 |
| CAST | -1.867 | -3.056 |
| CCcont | 0.737 | 1.143 |
| DS01 | -3.896 | -1.906 |
| DS02 | -2.978 | -2.002 |
| DS04 | -1.873 | -1.834 |
| DS0c | -2.545 | -2.077 |
| GP01 | 0.694 | 0.999 |
| GP02 | -0.603 | 0.813 |
| GP0c | 1.206 | 0.702 |
| NOD | -2.032 | -1.181 |
| NZO | -3.546 | -2.647 |
| PWK | -3.083 | -2.404 |
| H37Rv_KO_CtpC | -1.072 | -1.477 |
| H37Rv_KO_CtpD | 0.231 | -0.385 |
| H37Rv_KO_Rv1272 | -0.187 | 0.593 |
| H37Rv_KO_SugABC | 1.096 | 0.685 |
| H37Rv_KO_MbtN | 0.144 | 1.06 |
| Trans05 | -0.044 | 0.019 |
| macrophage_unactivated | -0.947 | -1.061 |
| IL1 | 1.91 | 2.035 |
| Rapamycin | 1.906 | 1.847 |
| Tcell | -0.388 | -0.456 |
| GMCSF | -1.748 | -1.677 |
| IFNab | -2.21 | -1.871 |
| IFNg | -0.909 | -0.604 |
| IFNg_GMCSF1 | -1.361 | -0.635 |
| Rv1432_day32 | -3.512 | -2.587 |
| Rv1565c_day32 | -3.77 | -2.279 |
| secA2_input | 0.064 | -0.647 |
| delta_Rv3594 | -0.128 | 0.506 |
| delta_Rv3717 | -0.096 | -0.206 |
| delta_Rv3811 | -0.522 | 0.248 |
| delta_Rv0954 | -0.654 | -0.634 |
| PonA1 | -0.735 | 0.031 |
| EccD1_KO | 0.881 | -0.135 |
| EspI_KO | 0.707 | -0.405 |
| PE35_KO | 0.683 | -0.385 |
| PPE68_KO | 1.113 | -0.058 |
| glycerol2 | -0.932 | 0.118 |
| lignocerate | 0.179 | 1.43 |
| oleate | 1.041 | 0.726 |
| phosphatidylcholine | -0.563 | 0.22 |
| acetate | -0.595 | 0.959 |
| glucAc | -0.676 | 0.671 |
| Rv0950ko | 0.157 | 0.03 |
| Rv1096ko | 0.537 | 0.347 |
| Rv3684ko | 0.54 | 0.989 |
| delta_otsA_trehalose | 0.817 | 0.341 |