Top 10 genes with highest correlation to Rv3498c/mce4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3499c/mce4A | (cc=0.8788) | info on Rv3499c/mce4A |
| Rv3501c/yrbE4A | (cc=0.8542) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8492) | info on Rv3497c/mce4C |
| Rv3496c/mce4D | (cc=0.8454) | info on Rv3496c/mce4D |
| Rv3494c/mce4F | (cc=0.8432) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8343) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8092) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7439) | info on Rv3492c/- |
| Rv3723/- | (cc=0.7202) | info on Rv3723/- |
| Rv0199/- | (cc=0.7183) | info on Rv0199/- |
Correlation of Rv3498c/mce4B with Rv3500c/yrbE4B
Normalized LFCs for Rv3498c/mce4B:
(description and provenance of datasets)
| Rv3498c/mce4B | Rv3500c/yrbE4B | |
| Fe_supp_jason_reseq | 0.104 | 0.041 |
| low_pH_jason_reseq | 0.758 | -0.982 |
| NO_jason_reseq | 0.026 | 0.562 |
| B6_jason_reseq | -2.414 | -1.459 |
| MHCII_jason_reseq | -3.285 | -2.141 |
| Isoniazid02 | -0.307 | 0.013 |
| Rifampicin4 | 0.33 | -0.038 |
| Ethambutol3 | 0.236 | 0.225 |
| Meropenem3 | -0.93 | -0.568 |
| Vancomycin16 | 0.236 | 0.533 |
| Rv2680_day32 | -2.748 | -2.969 |
| H37Rv_KO_MarP | 0.864 | 0.028 |
| hypoxia_3wks | 0.518 | 0.391 |
| hypoxia_6wks | 0.34 | 0.155 |
| glycerol | -0.287 | -2.465 |
| cholesterol | -3.124 | -4.573 |
| AJ | -4.02 | -3.361 |
| Bibs02 | -0.621 | -0.917 |
| Bibs02c | -2.621 | -1.103 |
| BL6 | -0.086 | -1.464 |
| BL6a | -1.158 | -1.852 |
| BXD01 | -0.536 | -1.302 |
| BXD010 | -0.309 | -0.174 |
| BXD011 | -0.307 | -0.948 |
| BXD03 | -1.587 | -1.828 |
| BXD04 | -0.816 | -1.196 |
| BXD05 | -0.27 | -0.647 |
| BXD06 | -0.669 | -1.092 |
| BXD07 | 0.525 | -1.748 |
| BXD08 | -0.422 | -1.596 |
| BXD09 | -0.704 | -1.394 |
| CAST | -1.867 | -2.544 |
| CCcont | 0.737 | -0.652 |
| DS01 | -3.896 | -3.247 |
| DS02 | -2.978 | -2.382 |
| DS04 | -1.873 | -2.534 |
| DS0c | -2.545 | -1.516 |
| GP01 | 0.694 | -0.082 |
| GP02 | -0.603 | -0.734 |
| GP0c | 1.206 | -0.408 |
| NOD | -2.032 | -2.673 |
| NZO | -3.546 | -2.114 |
| PWK | -3.083 | -2.316 |
| H37Rv_KO_CtpC | -1.072 | -1.028 |
| H37Rv_KO_CtpD | 0.231 | -0.447 |
| H37Rv_KO_Rv1272 | -0.187 | -0.852 |
| H37Rv_KO_SugABC | 1.096 | 0.509 |
| H37Rv_KO_MbtN | 0.144 | 0.869 |
| Trans05 | -0.044 | -0.127 |
| macrophage_unactivated | -0.947 | -0.619 |
| IL1 | 1.91 | 2.213 |
| Rapamycin | 1.906 | 2.059 |
| Tcell | -0.388 | 0.257 |
| GMCSF | -1.748 | -1.964 |
| IFNab | -2.21 | -2.08 |
| IFNg | -0.909 | -0.612 |
| IFNg_GMCSF1 | -1.361 | -1.049 |
| Rv1432_day32 | -3.512 | -2.967 |
| Rv1565c_day32 | -3.77 | -2.853 |
| secA2_input | 0.064 | -0.316 |
| delta_Rv3594 | -0.128 | -0.066 |
| delta_Rv3717 | -0.096 | -0.42 |
| delta_Rv3811 | -0.522 | -0.04 |
| delta_Rv0954 | -0.654 | -0.419 |
| PonA1 | -0.735 | 0.129 |
| EccD1_KO | 0.881 | 0.572 |
| EspI_KO | 0.707 | 0.088 |
| PE35_KO | 0.683 | -0.362 |
| PPE68_KO | 1.113 | -0.195 |
| glycerol2 | -0.932 | -0.412 |
| lignocerate | 0.179 | 0.546 |
| oleate | 1.041 | 1.51 |
| phosphatidylcholine | -0.563 | -0.01 |
| acetate | -0.595 | -0.288 |
| glucAc | -0.676 | 0.103 |
| Rv0950ko | 0.157 | 0.446 |
| Rv1096ko | 0.537 | 0.238 |
| Rv3684ko | 0.54 | 0.563 |
| delta_otsA_trehalose | 0.817 | 0.05 |