Top 10 genes with highest correlation to Rv3498c/mce4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3499c/mce4A | (cc=0.8788) | info on Rv3499c/mce4A |
| Rv3501c/yrbE4A | (cc=0.8542) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8492) | info on Rv3497c/mce4C |
| Rv3496c/mce4D | (cc=0.8454) | info on Rv3496c/mce4D |
| Rv3494c/mce4F | (cc=0.8432) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8343) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8092) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7439) | info on Rv3492c/- |
| Rv3723/- | (cc=0.7202) | info on Rv3723/- |
| Rv0199/- | (cc=0.7183) | info on Rv0199/- |
Correlation of Rv3498c/mce4B with Rv3496c/mce4D
Normalized LFCs for Rv3498c/mce4B:
(description and provenance of datasets)
| Rv3498c/mce4B | Rv3496c/mce4D | |
| Fe_supp_jason_reseq | 0.104 | 0.036 |
| low_pH_jason_reseq | 0.758 | -0.773 |
| NO_jason_reseq | 0.026 | 0.404 |
| B6_jason_reseq | -2.414 | -1.98 |
| MHCII_jason_reseq | -3.285 | -2.258 |
| Isoniazid02 | -0.307 | 0.045 |
| Rifampicin4 | 0.33 | 0.225 |
| Ethambutol3 | 0.236 | 0.761 |
| Meropenem3 | -0.93 | -1.18 |
| Vancomycin16 | 0.236 | 0.446 |
| Rv2680_day32 | -2.748 | -2.31 |
| H37Rv_KO_MarP | 0.864 | 0.384 |
| hypoxia_3wks | 0.518 | 0.247 |
| hypoxia_6wks | 0.34 | 0.347 |
| glycerol | -0.287 | -0.243 |
| cholesterol | -3.124 | -3.912 |
| AJ | -4.02 | -3.652 |
| Bibs02 | -0.621 | -0.766 |
| Bibs02c | -2.621 | -1.02 |
| BL6 | -0.086 | -1.607 |
| BL6a | -1.158 | -1.435 |
| BXD01 | -0.536 | -1.196 |
| BXD010 | -0.309 | -0.499 |
| BXD011 | -0.307 | -1.314 |
| BXD03 | -1.587 | -0.769 |
| BXD04 | -0.816 | -1.792 |
| BXD05 | -0.27 | -0.949 |
| BXD06 | -0.669 | -1.076 |
| BXD07 | 0.525 | -0.898 |
| BXD08 | -0.422 | -1.059 |
| BXD09 | -0.704 | -1.258 |
| CAST | -1.867 | -2.81 |
| CCcont | 0.737 | -0.439 |
| DS01 | -3.896 | -2.881 |
| DS02 | -2.978 | -1.824 |
| DS04 | -1.873 | -2.773 |
| DS0c | -2.545 | -2.073 |
| GP01 | 0.694 | -0.421 |
| GP02 | -0.603 | -0.611 |
| GP0c | 1.206 | -0.039 |
| NOD | -2.032 | -2.602 |
| NZO | -3.546 | -2.465 |
| PWK | -3.083 | -2.693 |
| H37Rv_KO_CtpC | -1.072 | -1.81 |
| H37Rv_KO_CtpD | 0.231 | -0.753 |
| H37Rv_KO_Rv1272 | -0.187 | -0.326 |
| H37Rv_KO_SugABC | 1.096 | 0.223 |
| H37Rv_KO_MbtN | 0.144 | 1.117 |
| Trans05 | -0.044 | -0.627 |
| macrophage_unactivated | -0.947 | -1.417 |
| IL1 | 1.91 | 1.969 |
| Rapamycin | 1.906 | 1.608 |
| Tcell | -0.388 | -0.375 |
| GMCSF | -1.748 | -1.798 |
| IFNab | -2.21 | -1.726 |
| IFNg | -0.909 | -0.959 |
| IFNg_GMCSF1 | -1.361 | -1.694 |
| Rv1432_day32 | -3.512 | -0.941 |
| Rv1565c_day32 | -3.77 | -2.286 |
| secA2_input | 0.064 | 0.014 |
| delta_Rv3594 | -0.128 | -0.5 |
| delta_Rv3717 | -0.096 | -0.242 |
| delta_Rv3811 | -0.522 | -0.449 |
| delta_Rv0954 | -0.654 | -0.017 |
| PonA1 | -0.735 | -0.07 |
| EccD1_KO | 0.881 | 0.516 |
| EspI_KO | 0.707 | 0.322 |
| PE35_KO | 0.683 | -0.403 |
| PPE68_KO | 1.113 | 0.301 |
| glycerol2 | -0.932 | -0.729 |
| lignocerate | 0.179 | 0.337 |
| oleate | 1.041 | 0.7 |
| phosphatidylcholine | -0.563 | -0.535 |
| acetate | -0.595 | -0.175 |
| glucAc | -0.676 | -0.569 |
| Rv0950ko | 0.157 | 0.642 |
| Rv1096ko | 0.537 | 1.33 |
| Rv3684ko | 0.54 | 1.14 |
| delta_otsA_trehalose | 0.817 | 0.795 |