Top 10 genes with highest correlation to Rv3498c/mce4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3499c/mce4A | (cc=0.8788) | info on Rv3499c/mce4A |
| Rv3501c/yrbE4A | (cc=0.8542) | info on Rv3501c/yrbE4A |
| Rv3497c/mce4C | (cc=0.8492) | info on Rv3497c/mce4C |
| Rv3496c/mce4D | (cc=0.8454) | info on Rv3496c/mce4D |
| Rv3494c/mce4F | (cc=0.8432) | info on Rv3494c/mce4F |
| Rv3500c/yrbE4B | (cc=0.8343) | info on Rv3500c/yrbE4B |
| Rv3495c/lprN | (cc=0.8092) | info on Rv3495c/lprN |
| Rv3492c/- | (cc=0.7439) | info on Rv3492c/- |
| Rv3723/- | (cc=0.7202) | info on Rv3723/- |
| Rv0199/- | (cc=0.7183) | info on Rv0199/- |
Correlation of Rv3498c/mce4B with Rv3499c/mce4A
Normalized LFCs for Rv3498c/mce4B:
(description and provenance of datasets)
| Rv3498c/mce4B | Rv3499c/mce4A | |
| Fe_supp_jason_reseq | 0.104 | -0.054 |
| low_pH_jason_reseq | 0.758 | -0.44 |
| NO_jason_reseq | 0.026 | 0.252 |
| B6_jason_reseq | -2.414 | -1.731 |
| MHCII_jason_reseq | -3.285 | -2.073 |
| Isoniazid02 | -0.307 | -0.116 |
| Rifampicin4 | 0.33 | 0.382 |
| Ethambutol3 | 0.236 | -0.288 |
| Meropenem3 | -0.93 | -0.979 |
| Vancomycin16 | 0.236 | 0.101 |
| Rv2680_day32 | -2.748 | -2.57 |
| H37Rv_KO_MarP | 0.864 | 0.435 |
| hypoxia_3wks | 0.518 | 0.148 |
| hypoxia_6wks | 0.34 | 0.418 |
| glycerol | -0.287 | -0.295 |
| cholesterol | -3.124 | -2.911 |
| AJ | -4.02 | -3.047 |
| Bibs02 | -0.621 | -1.714 |
| Bibs02c | -2.621 | -0.552 |
| BL6 | -0.086 | -0.317 |
| BL6a | -1.158 | -1.032 |
| BXD01 | -0.536 | -0.713 |
| BXD010 | -0.309 | -0.434 |
| BXD011 | -0.307 | -0.446 |
| BXD03 | -1.587 | -1.14 |
| BXD04 | -0.816 | -0.957 |
| BXD05 | -0.27 | -0.426 |
| BXD06 | -0.669 | -0.924 |
| BXD07 | 0.525 | -0.836 |
| BXD08 | -0.422 | -1.444 |
| BXD09 | -0.704 | -0.952 |
| CAST | -1.867 | -1.984 |
| CCcont | 0.737 | 0.171 |
| DS01 | -3.896 | -2.459 |
| DS02 | -2.978 | -1.473 |
| DS04 | -1.873 | -1.897 |
| DS0c | -2.545 | -1.469 |
| GP01 | 0.694 | -0.764 |
| GP02 | -0.603 | -1.116 |
| GP0c | 1.206 | 0.239 |
| NOD | -2.032 | -1.17 |
| NZO | -3.546 | -2.212 |
| PWK | -3.083 | -1.518 |
| H37Rv_KO_CtpC | -1.072 | -0.867 |
| H37Rv_KO_CtpD | 0.231 | -0.487 |
| H37Rv_KO_Rv1272 | -0.187 | 0.802 |
| H37Rv_KO_SugABC | 1.096 | 0.69 |
| H37Rv_KO_MbtN | 0.144 | 0.596 |
| Trans05 | -0.044 | -0.133 |
| macrophage_unactivated | -0.947 | -1.196 |
| IL1 | 1.91 | 2.236 |
| Rapamycin | 1.906 | 2.065 |
| Tcell | -0.388 | -0.323 |
| GMCSF | -1.748 | -1.325 |
| IFNab | -2.21 | -1.496 |
| IFNg | -0.909 | -0.575 |
| IFNg_GMCSF1 | -1.361 | -1.596 |
| Rv1432_day32 | -3.512 | -3.85 |
| Rv1565c_day32 | -3.77 | -2.132 |
| secA2_input | 0.064 | -0.557 |
| delta_Rv3594 | -0.128 | 0.133 |
| delta_Rv3717 | -0.096 | -0.184 |
| delta_Rv3811 | -0.522 | 0.184 |
| delta_Rv0954 | -0.654 | 0.136 |
| PonA1 | -0.735 | -0.169 |
| EccD1_KO | 0.881 | 0.845 |
| EspI_KO | 0.707 | 1.306 |
| PE35_KO | 0.683 | 0.327 |
| PPE68_KO | 1.113 | 0.71 |
| glycerol2 | -0.932 | -0.614 |
| lignocerate | 0.179 | 0.259 |
| oleate | 1.041 | 0.637 |
| phosphatidylcholine | -0.563 | -0.427 |
| acetate | -0.595 | -0.484 |
| glucAc | -0.676 | -0.501 |
| Rv0950ko | 0.157 | 0.115 |
| Rv1096ko | 0.537 | 0.069 |
| Rv3684ko | 0.54 | -0.075 |
| delta_otsA_trehalose | 0.817 | 0.179 |