Top 10 genes with highest correlation to Rv3491/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3213c/- | (cc=0.5362) | info on Rv3213c/- |
| Rv3083/- | (cc=0.5114) | info on Rv3083/- |
| Rv3287c/rsbW | (cc=0.4998) | info on Rv3287c/rsbW |
| Rv3559c/- | (cc=0.4969) | info on Rv3559c/- |
| Rv1833c/- | (cc=0.4868) | info on Rv1833c/- |
| Rv0935/pstC1 | (cc=0.4838) | info on Rv0935/pstC1 |
| Rv1932/tpx | (cc=0.4735) | info on Rv1932/tpx |
| Rv2802c/- | (cc=0.4701) | info on Rv2802c/- |
| Rv2583c/relA | (cc=0.469) | info on Rv2583c/relA |
| Rv0521/- | (cc=0.4501) | info on Rv0521/- |
Correlation of Rv3491/- with Rv3287c/rsbW
Normalized LFCs for Rv3491/-:
(description and provenance of datasets)
| Rv3491/- | Rv3287c/rsbW | |
| Fe_supp_jason_reseq | 0.115 | -0.033 |
| low_pH_jason_reseq | -0.229 | -0.82 |
| NO_jason_reseq | -0.024 | -1.247 |
| B6_jason_reseq | 0.176 | -1.009 |
| MHCII_jason_reseq | -1.121 | -0.522 |
| Isoniazid02 | -0.515 | 0.045 |
| Rifampicin4 | 0.19 | 0.669 |
| Ethambutol3 | 1.906 | 0.075 |
| Meropenem3 | 0.788 | -0.098 |
| Vancomycin16 | 0.024 | 0.361 |
| Rv2680_day32 | 0.514 | -0.459 |
| H37Rv_KO_MarP | 1.047 | 0.309 |
| hypoxia_3wks | -0.239 | 0.0 |
| hypoxia_6wks | -0.388 | 0.699 |
| glycerol | -0.086 | 1.559 |
| cholesterol | -0.014 | 1.391 |
| AJ | -0.748 | -2.066 |
| Bibs02 | -0.532 | 0.946 |
| Bibs02c | -1.44 | -0.029 |
| BL6 | 0.299 | 2.01 |
| BL6a | -0.947 | 0.511 |
| BXD01 | 0.63 | 0.054 |
| BXD010 | 0.423 | 1.072 |
| BXD011 | -0.13 | 2.975 |
| BXD03 | -0.677 | 1.626 |
| BXD04 | 0.536 | 2.202 |
| BXD05 | 0.52 | 0.332 |
| BXD06 | -0.163 | 1.198 |
| BXD07 | 0.371 | 0.954 |
| BXD08 | -0.462 | 0.837 |
| BXD09 | -0.232 | 1.506 |
| CAST | -0.053 | -1.074 |
| CCcont | 0.34 | 1.769 |
| DS01 | 0.086 | -0.171 |
| DS02 | 0.421 | 1.049 |
| DS04 | -0.309 | 1.351 |
| DS0c | 0.06 | -1.262 |
| GP01 | 0.221 | 0.659 |
| GP02 | 1.348 | 1.791 |
| GP0c | -0.037 | 0.867 |
| NOD | -0.444 | -0.952 |
| NZO | -0.594 | 0.309 |
| PWK | -0.18 | 1.047 |
| H37Rv_KO_CtpC | -0.225 | 1.85 |
| H37Rv_KO_CtpD | -0.615 | 1.512 |
| H37Rv_KO_Rv1272 | -0.173 | 0.565 |
| H37Rv_KO_SugABC | -0.664 | 0.545 |
| H37Rv_KO_MbtN | -0.307 | 0.809 |
| Trans05 | -0.831 | -0.423 |
| macrophage_unactivated | 0.047 | -0.451 |
| IL1 | -0.744 | 1.667 |
| Rapamycin | -0.292 | 1.102 |
| Tcell | -0.101 | -1.013 |
| GMCSF | 0.198 | -0.256 |
| IFNab | -0.517 | -1.203 |
| IFNg | -0.233 | 0.815 |
| IFNg_GMCSF1 | 0.672 | 2.231 |
| Rv1432_day32 | -0.382 | -0.301 |
| Rv1565c_day32 | -0.689 | 0.951 |
| secA2_input | -0.075 | 0.136 |
| delta_Rv3594 | 0.402 | 1.728 |
| delta_Rv3717 | 0.014 | 0.88 |
| delta_Rv3811 | 0.378 | 2.0 |
| delta_Rv0954 | 0.305 | 0.876 |
| PonA1 | 0.844 | 1.49 |
| EccD1_KO | 0.411 | 0.497 |
| EspI_KO | -0.821 | -0.191 |
| PE35_KO | -0.073 | 1.797 |
| PPE68_KO | -0.106 | 0.643 |
| glycerol2 | 0.954 | 4.278 |
| lignocerate | 1.329 | 4.612 |
| oleate | 0.685 | 2.62 |
| phosphatidylcholine | 0.927 | 4.323 |
| acetate | 1.553 | 6.0 |
| glucAc | 0.944 | 4.153 |
| Rv0950ko | 0.024 | -0.057 |
| Rv1096ko | -0.148 | 1.62 |
| Rv3684ko | 0.105 | 0.845 |
| delta_otsA_trehalose | 1.736 | 3.074 |