Top 10 genes with highest correlation to Rv3491/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3213c/- | (cc=0.5362) | info on Rv3213c/- |
| Rv3083/- | (cc=0.5114) | info on Rv3083/- |
| Rv3287c/rsbW | (cc=0.4998) | info on Rv3287c/rsbW |
| Rv3559c/- | (cc=0.4969) | info on Rv3559c/- |
| Rv1833c/- | (cc=0.4868) | info on Rv1833c/- |
| Rv0935/pstC1 | (cc=0.4838) | info on Rv0935/pstC1 |
| Rv1932/tpx | (cc=0.4735) | info on Rv1932/tpx |
| Rv2802c/- | (cc=0.4701) | info on Rv2802c/- |
| Rv2583c/relA | (cc=0.469) | info on Rv2583c/relA |
| Rv0521/- | (cc=0.4501) | info on Rv0521/- |
Correlation of Rv3491/- with Rv1833c/-
Normalized LFCs for Rv3491/-:
(description and provenance of datasets)
| Rv3491/- | Rv1833c/- | |
| Fe_supp_jason_reseq | 0.115 | -0.456 |
| low_pH_jason_reseq | -0.229 | -0.502 |
| NO_jason_reseq | -0.024 | 0.071 |
| B6_jason_reseq | 0.176 | -0.689 |
| MHCII_jason_reseq | -1.121 | -0.529 |
| Isoniazid02 | -0.515 | 1.359 |
| Rifampicin4 | 0.19 | 0.801 |
| Ethambutol3 | 1.906 | 2.69 |
| Meropenem3 | 0.788 | 1.206 |
| Vancomycin16 | 0.024 | 0.464 |
| Rv2680_day32 | 0.514 | -0.806 |
| H37Rv_KO_MarP | 1.047 | -0.291 |
| hypoxia_3wks | -0.239 | -0.877 |
| hypoxia_6wks | -0.388 | 0.221 |
| glycerol | -0.086 | -0.408 |
| cholesterol | -0.014 | 0.541 |
| AJ | -0.748 | -1.303 |
| Bibs02 | -0.532 | -0.54 |
| Bibs02c | -1.44 | -0.279 |
| BL6 | 0.299 | -0.346 |
| BL6a | -0.947 | -0.509 |
| BXD01 | 0.63 | -0.299 |
| BXD010 | 0.423 | -0.329 |
| BXD011 | -0.13 | -0.038 |
| BXD03 | -0.677 | -1.04 |
| BXD04 | 0.536 | -0.648 |
| BXD05 | 0.52 | -0.398 |
| BXD06 | -0.163 | 0.226 |
| BXD07 | 0.371 | -0.127 |
| BXD08 | -0.462 | -0.446 |
| BXD09 | -0.232 | -0.457 |
| CAST | -0.053 | 0.776 |
| CCcont | 0.34 | -0.427 |
| DS01 | 0.086 | 0.2 |
| DS02 | 0.421 | 0.369 |
| DS04 | -0.309 | -0.242 |
| DS0c | 0.06 | -0.308 |
| GP01 | 0.221 | -0.998 |
| GP02 | 1.348 | 0.435 |
| GP0c | -0.037 | 0.236 |
| NOD | -0.444 | 1.29 |
| NZO | -0.594 | -0.532 |
| PWK | -0.18 | -0.396 |
| H37Rv_KO_CtpC | -0.225 | -0.344 |
| H37Rv_KO_CtpD | -0.615 | 0.292 |
| H37Rv_KO_Rv1272 | -0.173 | 0.139 |
| H37Rv_KO_SugABC | -0.664 | -0.732 |
| H37Rv_KO_MbtN | -0.307 | 1.985 |
| Trans05 | -0.831 | -0.241 |
| macrophage_unactivated | 0.047 | -0.862 |
| IL1 | -0.744 | -1.255 |
| Rapamycin | -0.292 | -0.706 |
| Tcell | -0.101 | -1.03 |
| GMCSF | 0.198 | -0.43 |
| IFNab | -0.517 | -0.868 |
| IFNg | -0.233 | -1.486 |
| IFNg_GMCSF1 | 0.672 | -0.386 |
| Rv1432_day32 | -0.382 | -0.153 |
| Rv1565c_day32 | -0.689 | 0.13 |
| secA2_input | -0.075 | -1.086 |
| delta_Rv3594 | 0.402 | 0.716 |
| delta_Rv3717 | 0.014 | 0.443 |
| delta_Rv3811 | 0.378 | 0.915 |
| delta_Rv0954 | 0.305 | 0.756 |
| PonA1 | 0.844 | 1.118 |
| EccD1_KO | 0.411 | 0.039 |
| EspI_KO | -0.821 | -0.533 |
| PE35_KO | -0.073 | -0.344 |
| PPE68_KO | -0.106 | 0.31 |
| glycerol2 | 0.954 | 0.224 |
| lignocerate | 1.329 | 1.335 |
| oleate | 0.685 | -0.123 |
| phosphatidylcholine | 0.927 | 0.668 |
| acetate | 1.553 | 2.091 |
| glucAc | 0.944 | 1.638 |
| Rv0950ko | 0.024 | 0.259 |
| Rv1096ko | -0.148 | 0.383 |
| Rv3684ko | 0.105 | 0.996 |
| delta_otsA_trehalose | 1.736 | 0.44 |