Top 10 genes with highest correlation to Rv3483c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3705c/- | (cc=0.5625) | info on Rv3705c/- |
| Rv3197/- | (cc=0.5439) | info on Rv3197/- |
| Rv0418/lpqL | (cc=0.4988) | info on Rv0418/lpqL |
| Rv3561/fadD3 | (cc=0.4912) | info on Rv3561/fadD3 |
| Rv1193/fadD36 | (cc=0.4865) | info on Rv1193/fadD36 |
| Rv0409/ackA | (cc=0.4762) | info on Rv0409/ackA |
| Rv1791/PE19 | (cc=0.4739) | info on Rv1791/PE19 |
| Rv2053c/fxsA | (cc=0.4685) | info on Rv2053c/fxsA |
| Rv3000/- | (cc=0.4636) | info on Rv3000/- |
| Rv0317c/glpQ2 | (cc=0.4625) | info on Rv0317c/glpQ2 |
Correlation of Rv3483c/- with Rv3000/-
Normalized LFCs for Rv3483c/-:
(description and provenance of datasets)
| Rv3483c/- | Rv3000/- | |
| Fe_supp_jason_reseq | 1.085 | -0.174 |
| low_pH_jason_reseq | -0.341 | -1.44 |
| NO_jason_reseq | -0.488 | -2.016 |
| B6_jason_reseq | -0.514 | -0.536 |
| MHCII_jason_reseq | -0.697 | -0.351 |
| Isoniazid02 | 1.433 | -0.135 |
| Rifampicin4 | -0.187 | -0.341 |
| Ethambutol3 | 1.747 | 0.302 |
| Meropenem3 | 3.141 | 4.471 |
| Vancomycin16 | 0.252 | 0.379 |
| Rv2680_day32 | -0.025 | 0.579 |
| H37Rv_KO_MarP | -0.048 | 1.088 |
| hypoxia_3wks | 0.044 | 1.384 |
| hypoxia_6wks | -0.157 | 2.268 |
| glycerol | 0.317 | 0.404 |
| cholesterol | 0.289 | -0.153 |
| AJ | -0.373 | -0.064 |
| Bibs02 | 0.371 | 0.323 |
| Bibs02c | -0.42 | 0.418 |
| BL6 | 0.031 | -0.513 |
| BL6a | -0.339 | 0.568 |
| BXD01 | -0.428 | -0.744 |
| BXD010 | 0.56 | 0.123 |
| BXD011 | 0.026 | 1.288 |
| BXD03 | 0.154 | -0.089 |
| BXD04 | 0.056 | 0.397 |
| BXD05 | 0.178 | -0.013 |
| BXD06 | -0.516 | 0.482 |
| BXD07 | -0.171 | 0.387 |
| BXD08 | -0.974 | 0.048 |
| BXD09 | -0.253 | 0.876 |
| CAST | -0.891 | 0.202 |
| CCcont | -0.051 | -0.852 |
| DS01 | 0.628 | 0.611 |
| DS02 | 0.419 | -0.143 |
| DS04 | -0.342 | -0.37 |
| DS0c | 0.173 | -0.229 |
| GP01 | 0.512 | 0.538 |
| GP02 | 0.699 | -0.016 |
| GP0c | 0.312 | 0.535 |
| NOD | 0.055 | 0.327 |
| NZO | -0.896 | -0.738 |
| PWK | -0.807 | -0.439 |
| H37Rv_KO_CtpC | 0.273 | -2.104 |
| H37Rv_KO_CtpD | 1.786 | 0.724 |
| H37Rv_KO_Rv1272 | -0.363 | -1.968 |
| H37Rv_KO_SugABC | -0.204 | -0.896 |
| H37Rv_KO_MbtN | -0.713 | 0.116 |
| Trans05 | 0.468 | -0.206 |
| macrophage_unactivated | 0.884 | -0.221 |
| IL1 | 1.332 | 0.335 |
| Rapamycin | 1.415 | -0.411 |
| Tcell | 0.303 | -0.163 |
| GMCSF | 0.692 | 0.298 |
| IFNab | 0.472 | -0.151 |
| IFNg | 0.235 | 0.027 |
| IFNg_GMCSF1 | 0.581 | -0.77 |
| Rv1432_day32 | -0.494 | 0.0 |
| Rv1565c_day32 | 0.586 | 0.633 |
| secA2_input | 0.529 | 0.571 |
| delta_Rv3594 | -0.246 | 0.493 |
| delta_Rv3717 | -0.385 | 0.715 |
| delta_Rv3811 | -0.694 | 0.479 |
| delta_Rv0954 | 0.663 | 1.081 |
| PonA1 | 0.469 | -0.402 |
| EccD1_KO | -0.602 | -1.21 |
| EspI_KO | -0.337 | -0.667 |
| PE35_KO | -1.21 | -1.073 |
| PPE68_KO | -0.95 | -1.104 |
| glycerol2 | -0.198 | 0.122 |
| lignocerate | 0.163 | -0.505 |
| oleate | 0.6 | 0.556 |
| phosphatidylcholine | 0.367 | 0.238 |
| acetate | -0.442 | -1.011 |
| glucAc | -0.425 | -1.233 |
| Rv0950ko | 1.285 | -0.184 |
| Rv1096ko | 1.01 | 0.293 |
| Rv3684ko | -0.246 | -0.485 |
| delta_otsA_trehalose | 1.284 | 0.98 |