Top 10 genes with highest correlation to Rv3483c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3705c/- | (cc=0.5625) | info on Rv3705c/- |
| Rv3197/- | (cc=0.5439) | info on Rv3197/- |
| Rv0418/lpqL | (cc=0.4988) | info on Rv0418/lpqL |
| Rv3561/fadD3 | (cc=0.4912) | info on Rv3561/fadD3 |
| Rv1193/fadD36 | (cc=0.4865) | info on Rv1193/fadD36 |
| Rv0409/ackA | (cc=0.4762) | info on Rv0409/ackA |
| Rv1791/PE19 | (cc=0.4739) | info on Rv1791/PE19 |
| Rv2053c/fxsA | (cc=0.4685) | info on Rv2053c/fxsA |
| Rv3000/- | (cc=0.4636) | info on Rv3000/- |
| Rv0317c/glpQ2 | (cc=0.4625) | info on Rv0317c/glpQ2 |
Correlation of Rv3483c/- with Rv0418/lpqL
Normalized LFCs for Rv3483c/-:
(description and provenance of datasets)
| Rv3483c/- | Rv0418/lpqL | |
| Fe_supp_jason_reseq | 1.085 | -0.721 |
| low_pH_jason_reseq | -0.341 | -0.105 |
| NO_jason_reseq | -0.488 | -0.459 |
| B6_jason_reseq | -0.514 | -0.445 |
| MHCII_jason_reseq | -0.697 | 0.712 |
| Isoniazid02 | 1.433 | 0.981 |
| Rifampicin4 | -0.187 | 0.319 |
| Ethambutol3 | 1.747 | 0.866 |
| Meropenem3 | 3.141 | 3.701 |
| Vancomycin16 | 0.252 | 0.459 |
| Rv2680_day32 | -0.025 | -1.64 |
| H37Rv_KO_MarP | -0.048 | 1.348 |
| hypoxia_3wks | 0.044 | -0.183 |
| hypoxia_6wks | -0.157 | -0.685 |
| glycerol | 0.317 | 0.543 |
| cholesterol | 0.289 | 0.284 |
| AJ | -0.373 | -0.192 |
| Bibs02 | 0.371 | 1.069 |
| Bibs02c | -0.42 | -0.073 |
| BL6 | 0.031 | -0.216 |
| BL6a | -0.339 | -1.065 |
| BXD01 | -0.428 | -1.278 |
| BXD010 | 0.56 | -1.018 |
| BXD011 | 0.026 | -0.71 |
| BXD03 | 0.154 | -0.862 |
| BXD04 | 0.056 | -1.143 |
| BXD05 | 0.178 | -0.674 |
| BXD06 | -0.516 | -1.197 |
| BXD07 | -0.171 | -0.668 |
| BXD08 | -0.974 | -1.09 |
| BXD09 | -0.253 | -0.783 |
| CAST | -0.891 | -0.429 |
| CCcont | -0.051 | -0.361 |
| DS01 | 0.628 | 0.717 |
| DS02 | 0.419 | 0.97 |
| DS04 | -0.342 | -0.136 |
| DS0c | 0.173 | -0.493 |
| GP01 | 0.512 | -0.034 |
| GP02 | 0.699 | -1.034 |
| GP0c | 0.312 | -0.604 |
| NOD | 0.055 | 0.026 |
| NZO | -0.896 | -0.318 |
| PWK | -0.807 | -0.649 |
| H37Rv_KO_CtpC | 0.273 | -0.937 |
| H37Rv_KO_CtpD | 1.786 | 1.28 |
| H37Rv_KO_Rv1272 | -0.363 | 0.25 |
| H37Rv_KO_SugABC | -0.204 | 0.258 |
| H37Rv_KO_MbtN | -0.713 | -1.244 |
| Trans05 | 0.468 | -0.433 |
| macrophage_unactivated | 0.884 | 0.079 |
| IL1 | 1.332 | 0.148 |
| Rapamycin | 1.415 | 0.847 |
| Tcell | 0.303 | -0.342 |
| GMCSF | 0.692 | -0.576 |
| IFNab | 0.472 | 0.296 |
| IFNg | 0.235 | -0.139 |
| IFNg_GMCSF1 | 0.581 | 0.157 |
| Rv1432_day32 | -0.494 | -0.645 |
| Rv1565c_day32 | 0.586 | 0.567 |
| secA2_input | 0.529 | 0.16 |
| delta_Rv3594 | -0.246 | -1.94 |
| delta_Rv3717 | -0.385 | -1.487 |
| delta_Rv3811 | -0.694 | -1.975 |
| delta_Rv0954 | 0.663 | -0.505 |
| PonA1 | 0.469 | -0.993 |
| EccD1_KO | -0.602 | 0.25 |
| EspI_KO | -0.337 | 0.054 |
| PE35_KO | -1.21 | 0.222 |
| PPE68_KO | -0.95 | -0.458 |
| glycerol2 | -0.198 | 0.15 |
| lignocerate | 0.163 | -0.069 |
| oleate | 0.6 | -1.581 |
| phosphatidylcholine | 0.367 | -0.531 |
| acetate | -0.442 | 0.941 |
| glucAc | -0.425 | 0.378 |
| Rv0950ko | 1.285 | 0.238 |
| Rv1096ko | 1.01 | 0.573 |
| Rv3684ko | -0.246 | 0.383 |
| delta_otsA_trehalose | 1.284 | -0.081 |