Top 10 genes with highest correlation to Rv3483c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3705c/- | (cc=0.5625) | info on Rv3705c/- |
| Rv3197/- | (cc=0.5439) | info on Rv3197/- |
| Rv0418/lpqL | (cc=0.4988) | info on Rv0418/lpqL |
| Rv3561/fadD3 | (cc=0.4912) | info on Rv3561/fadD3 |
| Rv1193/fadD36 | (cc=0.4865) | info on Rv1193/fadD36 |
| Rv0409/ackA | (cc=0.4762) | info on Rv0409/ackA |
| Rv1791/PE19 | (cc=0.4739) | info on Rv1791/PE19 |
| Rv2053c/fxsA | (cc=0.4685) | info on Rv2053c/fxsA |
| Rv3000/- | (cc=0.4636) | info on Rv3000/- |
| Rv0317c/glpQ2 | (cc=0.4625) | info on Rv0317c/glpQ2 |
Correlation of Rv3483c/- with Rv0409/ackA
Normalized LFCs for Rv3483c/-:
(description and provenance of datasets)
| Rv3483c/- | Rv0409/ackA | |
| Fe_supp_jason_reseq | 1.085 | 0.868 |
| low_pH_jason_reseq | -0.341 | 0.136 |
| NO_jason_reseq | -0.488 | 0.315 |
| B6_jason_reseq | -0.514 | -0.581 |
| MHCII_jason_reseq | -0.697 | -0.541 |
| Isoniazid02 | 1.433 | 0.112 |
| Rifampicin4 | -0.187 | 0.0 |
| Ethambutol3 | 1.747 | 2.079 |
| Meropenem3 | 3.141 | 3.648 |
| Vancomycin16 | 0.252 | 0.395 |
| Rv2680_day32 | -0.025 | 0.362 |
| H37Rv_KO_MarP | -0.048 | 0.024 |
| hypoxia_3wks | 0.044 | 0.152 |
| hypoxia_6wks | -0.157 | -0.827 |
| glycerol | 0.317 | 0.028 |
| cholesterol | 0.289 | 0.43 |
| AJ | -0.373 | -0.919 |
| Bibs02 | 0.371 | 1.699 |
| Bibs02c | -0.42 | -0.411 |
| BL6 | 0.031 | 0.507 |
| BL6a | -0.339 | -0.199 |
| BXD01 | -0.428 | 0.053 |
| BXD010 | 0.56 | 0.589 |
| BXD011 | 0.026 | 0.704 |
| BXD03 | 0.154 | -0.157 |
| BXD04 | 0.056 | -0.541 |
| BXD05 | 0.178 | 0.909 |
| BXD06 | -0.516 | 0.156 |
| BXD07 | -0.171 | -0.391 |
| BXD08 | -0.974 | 0.514 |
| BXD09 | -0.253 | -0.502 |
| CAST | -0.891 | -0.736 |
| CCcont | -0.051 | 0.04 |
| DS01 | 0.628 | 0.821 |
| DS02 | 0.419 | 0.484 |
| DS04 | -0.342 | 0.343 |
| DS0c | 0.173 | 1.702 |
| GP01 | 0.512 | -0.496 |
| GP02 | 0.699 | -1.302 |
| GP0c | 0.312 | 0.152 |
| NOD | 0.055 | -1.178 |
| NZO | -0.896 | -0.6 |
| PWK | -0.807 | -0.082 |
| H37Rv_KO_CtpC | 0.273 | 0.149 |
| H37Rv_KO_CtpD | 1.786 | 1.112 |
| H37Rv_KO_Rv1272 | -0.363 | -0.253 |
| H37Rv_KO_SugABC | -0.204 | -1.071 |
| H37Rv_KO_MbtN | -0.713 | 0.446 |
| Trans05 | 0.468 | 0.319 |
| macrophage_unactivated | 0.884 | -0.486 |
| IL1 | 1.332 | 0.16 |
| Rapamycin | 1.415 | 0.218 |
| Tcell | 0.303 | -0.437 |
| GMCSF | 0.692 | -1.048 |
| IFNab | 0.472 | -0.59 |
| IFNg | 0.235 | -0.305 |
| IFNg_GMCSF1 | 0.581 | -1.1 |
| Rv1432_day32 | -0.494 | -0.654 |
| Rv1565c_day32 | 0.586 | 0.389 |
| secA2_input | 0.529 | -0.205 |
| delta_Rv3594 | -0.246 | 0.0 |
| delta_Rv3717 | -0.385 | -0.047 |
| delta_Rv3811 | -0.694 | -0.354 |
| delta_Rv0954 | 0.663 | -0.121 |
| PonA1 | 0.469 | 0.611 |
| EccD1_KO | -0.602 | -0.276 |
| EspI_KO | -0.337 | -1.007 |
| PE35_KO | -1.21 | -0.461 |
| PPE68_KO | -0.95 | -0.045 |
| glycerol2 | -0.198 | 0.13 |
| lignocerate | 0.163 | -0.213 |
| oleate | 0.6 | -0.227 |
| phosphatidylcholine | 0.367 | 0.202 |
| acetate | -0.442 | -0.451 |
| glucAc | -0.425 | -0.693 |
| Rv0950ko | 1.285 | -0.13 |
| Rv1096ko | 1.01 | 0.368 |
| Rv3684ko | -0.246 | -0.141 |
| delta_otsA_trehalose | 1.284 | -0.965 |