Top 10 genes with highest correlation to Rv3477/PE31:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1995/- | (cc=0.4103) | info on Rv1995/- |
| Rv3179/- | (cc=0.4054) | info on Rv3179/- |
| Rv0045c/- | (cc=0.4024) | info on Rv0045c/- |
| Rv1153c/omt | (cc=0.4005) | info on Rv1153c/omt |
| Rv2684/arsA | (cc=0.3776) | info on Rv2684/arsA |
| Rv0551c/fadD8 | (cc=0.3685) | info on Rv0551c/fadD8 |
| Rv1467c/fadE15 | (cc=0.3634) | info on Rv1467c/fadE15 |
| Rv2642/- | (cc=0.3623) | info on Rv2642/- |
| Rv3067/- | (cc=0.3592) | info on Rv3067/- |
| Rv3839/- | (cc=0.3586) | info on Rv3839/- |
Correlation of Rv3477/PE31 with Rv1467c/fadE15
Normalized LFCs for Rv3477/PE31:
(description and provenance of datasets)
| Rv3477/PE31 | Rv1467c/fadE15 | |
| Fe_supp_jason_reseq | -0.066 | -1.137 |
| low_pH_jason_reseq | -0.119 | -0.445 |
| NO_jason_reseq | 1.205 | 0.333 |
| B6_jason_reseq | 0.895 | 0.297 |
| MHCII_jason_reseq | 2.001 | 1.286 |
| Isoniazid02 | -0.425 | -0.773 |
| Rifampicin4 | -0.073 | -0.403 |
| Ethambutol3 | -0.395 | -0.775 |
| Meropenem3 | -0.6 | -1.094 |
| Vancomycin16 | -1.183 | -0.69 |
| Rv2680_day32 | 0.653 | -0.793 |
| H37Rv_KO_MarP | 0.888 | 0.246 |
| hypoxia_3wks | -1.822 | -0.598 |
| hypoxia_6wks | -0.94 | 0.019 |
| glycerol | -1.494 | -0.65 |
| cholesterol | -2.006 | -0.791 |
| AJ | 0.698 | 0.348 |
| Bibs02 | -1.28 | -0.302 |
| Bibs02c | -1.12 | -0.593 |
| BL6 | -0.9 | -0.231 |
| BL6a | -0.752 | -1.21 |
| BXD01 | -0.198 | -0.815 |
| BXD010 | -0.115 | -1.216 |
| BXD011 | 0.703 | -0.778 |
| BXD03 | 0.437 | -1.257 |
| BXD04 | -0.025 | -0.447 |
| BXD05 | 0.342 | -0.463 |
| BXD06 | -0.219 | -0.748 |
| BXD07 | -0.187 | -1.167 |
| BXD08 | 0.097 | -0.746 |
| BXD09 | 0.149 | -0.956 |
| CAST | 0.365 | -0.01 |
| CCcont | -0.588 | -1.919 |
| DS01 | -0.373 | -0.897 |
| DS02 | -1.202 | -0.904 |
| DS04 | -0.295 | -0.668 |
| DS0c | -0.542 | -0.522 |
| GP01 | -0.273 | -0.357 |
| GP02 | -1.451 | 0.585 |
| GP0c | 0.076 | -0.361 |
| NOD | 2.042 | 0.775 |
| NZO | 0.049 | -0.051 |
| PWK | 0.144 | 0.563 |
| H37Rv_KO_CtpC | -1.287 | -1.041 |
| H37Rv_KO_CtpD | 0.469 | 0.116 |
| H37Rv_KO_Rv1272 | 0.66 | -0.339 |
| H37Rv_KO_SugABC | -0.128 | 0.263 |
| H37Rv_KO_MbtN | -0.501 | 0.0 |
| Trans05 | -0.614 | -0.567 |
| macrophage_unactivated | -0.044 | -0.795 |
| IL1 | 0.308 | -1.157 |
| Rapamycin | -0.227 | -1.332 |
| Tcell | 0.381 | -0.736 |
| GMCSF | -1.434 | -0.99 |
| IFNab | -0.042 | -1.687 |
| IFNg | -0.299 | -0.965 |
| IFNg_GMCSF1 | 0.22 | -0.792 |
| Rv1432_day32 | 0.18 | 0.0 |
| Rv1565c_day32 | 0.447 | -0.13 |
| secA2_input | 0.775 | -0.562 |
| delta_Rv3594 | -0.994 | 0.092 |
| delta_Rv3717 | -1.318 | 0.569 |
| delta_Rv3811 | -0.199 | 0.055 |
| delta_Rv0954 | -0.109 | 0.412 |
| PonA1 | 0.711 | 0.642 |
| EccD1_KO | 0.418 | 0.628 |
| EspI_KO | 0.67 | 0.516 |
| PE35_KO | 0.601 | -0.07 |
| PPE68_KO | 0.035 | -0.077 |
| glycerol2 | -0.314 | -0.244 |
| lignocerate | -0.262 | 0.116 |
| oleate | 0.549 | -0.498 |
| phosphatidylcholine | 0.657 | 0.112 |
| acetate | -0.678 | -0.083 |
| glucAc | -1.292 | 0.114 |
| Rv0950ko | -0.365 | -0.244 |
| Rv1096ko | 0.422 | 0.145 |
| Rv3684ko | -0.285 | -0.196 |
| delta_otsA_trehalose | 2.57 | 0.305 |