Top 10 genes with highest correlation to Rv3427c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1116/- | (cc=0.5951) | info on Rv1116/- |
| Rv1870c/- | (cc=0.5796) | info on Rv1870c/- |
| Rv3398c/idsA1 | (cc=0.5704) | info on Rv3398c/idsA1 |
| Rv2929/- | (cc=0.5618) | info on Rv2929/- |
| Rv2430c/PPE41 | (cc=0.5584) | info on Rv2430c/PPE41 |
| Rv3150/nuoF | (cc=0.5377) | info on Rv3150/nuoF |
| Rv3151/nuoG | (cc=0.5375) | info on Rv3151/nuoG |
| Rv1664/pks9 | (cc=0.5372) | info on Rv1664/pks9 |
| Rv1505c/- | (cc=0.5355) | info on Rv1505c/- |
| Rv3759c/proX | (cc=0.5228) | info on Rv3759c/proX |
Correlation of Rv3427c/- with Rv3759c/proX
Normalized LFCs for Rv3427c/-:
(description and provenance of datasets)
| Rv3427c/- | Rv3759c/proX | |
| Fe_supp_jason_reseq | -0.259 | -0.131 |
| low_pH_jason_reseq | -0.207 | -0.139 |
| NO_jason_reseq | 1.242 | -0.648 |
| B6_jason_reseq | -0.662 | -1.588 |
| MHCII_jason_reseq | -0.637 | -0.604 |
| Isoniazid02 | 2.559 | -0.307 |
| Rifampicin4 | -0.712 | -0.198 |
| Ethambutol3 | 0.479 | -0.207 |
| Meropenem3 | 0.386 | -0.043 |
| Vancomycin16 | -0.669 | 0.273 |
| Rv2680_day32 | -0.635 | 0.285 |
| H37Rv_KO_MarP | 0.775 | 0.428 |
| hypoxia_3wks | -0.14 | 0.506 |
| hypoxia_6wks | -0.134 | 1.432 |
| glycerol | -1.164 | 0.695 |
| cholesterol | -0.29 | -0.423 |
| AJ | 0.178 | 0.529 |
| Bibs02 | -1.959 | -1.189 |
| Bibs02c | 1.29 | -0.647 |
| BL6 | 0.69 | 1.359 |
| BL6a | 1.758 | 1.277 |
| BXD01 | 1.382 | 0.617 |
| BXD010 | 0.609 | 0.808 |
| BXD011 | 1.398 | 0.923 |
| BXD03 | 1.506 | 1.553 |
| BXD04 | 3.265 | 1.311 |
| BXD05 | 0.944 | 1.05 |
| BXD06 | 1.389 | 1.42 |
| BXD07 | 0.889 | 1.055 |
| BXD08 | 1.776 | 1.108 |
| BXD09 | 1.233 | 1.695 |
| CAST | 0.052 | -1.143 |
| CCcont | 1.228 | 0.594 |
| DS01 | 1.122 | -0.731 |
| DS02 | -0.101 | -0.458 |
| DS04 | -0.233 | -1.356 |
| DS0c | -0.127 | -0.057 |
| GP01 | 1.584 | -0.767 |
| GP02 | -0.48 | -1.184 |
| GP0c | 0.511 | -1.279 |
| NOD | -0.926 | -0.814 |
| NZO | -0.857 | -0.078 |
| PWK | 0.404 | 0.301 |
| H37Rv_KO_CtpC | 1.186 | 0.371 |
| H37Rv_KO_CtpD | 1.478 | 1.47 |
| H37Rv_KO_Rv1272 | 1.503 | 0.966 |
| H37Rv_KO_SugABC | 0.586 | 1.304 |
| H37Rv_KO_MbtN | -0.747 | -0.917 |
| Trans05 | 1.292 | 1.058 |
| macrophage_unactivated | 0.849 | -0.114 |
| IL1 | 0.169 | 0.682 |
| Rapamycin | 0.463 | 0.491 |
| Tcell | -0.023 | 0.228 |
| GMCSF | 0.911 | 0.272 |
| IFNab | 0.435 | 0.133 |
| IFNg | 0.767 | 0.869 |
| IFNg_GMCSF1 | 0.474 | 0.553 |
| Rv1432_day32 | -0.229 | 0.194 |
| Rv1565c_day32 | 1.044 | 0.881 |
| secA2_input | -0.083 | -1.268 |
| delta_Rv3594 | -0.242 | 0.252 |
| delta_Rv3717 | -0.356 | -1.472 |
| delta_Rv3811 | -1.209 | 0.126 |
| delta_Rv0954 | -0.751 | -0.262 |
| PonA1 | -1.521 | -2.103 |
| EccD1_KO | 0.0 | -0.27 |
| EspI_KO | 0.271 | -0.2 |
| PE35_KO | -0.589 | 0.321 |
| PPE68_KO | -0.442 | -0.112 |
| glycerol2 | -0.346 | -0.223 |
| lignocerate | -0.058 | -0.235 |
| oleate | -0.289 | 0.062 |
| phosphatidylcholine | -0.045 | -0.176 |
| acetate | -0.71 | -0.025 |
| glucAc | -0.427 | -0.536 |
| Rv0950ko | -0.069 | 0.624 |
| Rv1096ko | 0.271 | 0.86 |
| Rv3684ko | 0.102 | 0.128 |
| delta_otsA_trehalose | 1.23 | 0.291 |