Top 10 genes with highest correlation to Rv3427c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1116/- | (cc=0.5951) | info on Rv1116/- |
| Rv1870c/- | (cc=0.5796) | info on Rv1870c/- |
| Rv3398c/idsA1 | (cc=0.5704) | info on Rv3398c/idsA1 |
| Rv2929/- | (cc=0.5618) | info on Rv2929/- |
| Rv2430c/PPE41 | (cc=0.5584) | info on Rv2430c/PPE41 |
| Rv3150/nuoF | (cc=0.5377) | info on Rv3150/nuoF |
| Rv3151/nuoG | (cc=0.5375) | info on Rv3151/nuoG |
| Rv1664/pks9 | (cc=0.5372) | info on Rv1664/pks9 |
| Rv1505c/- | (cc=0.5355) | info on Rv1505c/- |
| Rv3759c/proX | (cc=0.5228) | info on Rv3759c/proX |
Correlation of Rv3427c/- with Rv1664/pks9
Normalized LFCs for Rv3427c/-:
(description and provenance of datasets)
| Rv3427c/- | Rv1664/pks9 | |
| Fe_supp_jason_reseq | -0.259 | 0.611 |
| low_pH_jason_reseq | -0.207 | 0.045 |
| NO_jason_reseq | 1.242 | 0.142 |
| B6_jason_reseq | -0.662 | -0.828 |
| MHCII_jason_reseq | -0.637 | -0.823 |
| Isoniazid02 | 2.559 | -0.615 |
| Rifampicin4 | -0.712 | 0.317 |
| Ethambutol3 | 0.479 | -0.916 |
| Meropenem3 | 0.386 | -0.43 |
| Vancomycin16 | -0.669 | -0.066 |
| Rv2680_day32 | -0.635 | -0.348 |
| H37Rv_KO_MarP | 0.775 | 0.185 |
| hypoxia_3wks | -0.14 | 0.1 |
| hypoxia_6wks | -0.134 | -0.109 |
| glycerol | -1.164 | 0.835 |
| cholesterol | -0.29 | 0.203 |
| AJ | 0.178 | -0.294 |
| Bibs02 | -1.959 | -0.642 |
| Bibs02c | 1.29 | -0.735 |
| BL6 | 0.69 | 0.357 |
| BL6a | 1.758 | 0.426 |
| BXD01 | 1.382 | 0.843 |
| BXD010 | 0.609 | 0.699 |
| BXD011 | 1.398 | 0.761 |
| BXD03 | 1.506 | 0.258 |
| BXD04 | 3.265 | 0.914 |
| BXD05 | 0.944 | 1.375 |
| BXD06 | 1.389 | 0.775 |
| BXD07 | 0.889 | 0.961 |
| BXD08 | 1.776 | 0.75 |
| BXD09 | 1.233 | 0.524 |
| CAST | 0.052 | -0.215 |
| CCcont | 1.228 | 0.618 |
| DS01 | 1.122 | 0.33 |
| DS02 | -0.101 | 0.246 |
| DS04 | -0.233 | 0.597 |
| DS0c | -0.127 | 0.717 |
| GP01 | 1.584 | 1.902 |
| GP02 | -0.48 | -0.078 |
| GP0c | 0.511 | 0.564 |
| NOD | -0.926 | -0.21 |
| NZO | -0.857 | -0.061 |
| PWK | 0.404 | -0.315 |
| H37Rv_KO_CtpC | 1.186 | 0.828 |
| H37Rv_KO_CtpD | 1.478 | 1.22 |
| H37Rv_KO_Rv1272 | 1.503 | 1.456 |
| H37Rv_KO_SugABC | 0.586 | 1.39 |
| H37Rv_KO_MbtN | -0.747 | 0.294 |
| Trans05 | 1.292 | 1.335 |
| macrophage_unactivated | 0.849 | 0.997 |
| IL1 | 0.169 | 0.866 |
| Rapamycin | 0.463 | 1.182 |
| Tcell | -0.023 | 1.105 |
| GMCSF | 0.911 | 1.017 |
| IFNab | 0.435 | 0.955 |
| IFNg | 0.767 | 0.906 |
| IFNg_GMCSF1 | 0.474 | 0.525 |
| Rv1432_day32 | -0.229 | -0.142 |
| Rv1565c_day32 | 1.044 | 0.531 |
| secA2_input | -0.083 | -0.65 |
| delta_Rv3594 | -0.242 | -0.311 |
| delta_Rv3717 | -0.356 | -1.008 |
| delta_Rv3811 | -1.209 | -0.47 |
| delta_Rv0954 | -0.751 | -0.74 |
| PonA1 | -1.521 | -0.744 |
| EccD1_KO | 0.0 | -0.549 |
| EspI_KO | 0.271 | -0.935 |
| PE35_KO | -0.589 | -0.563 |
| PPE68_KO | -0.442 | -0.454 |
| glycerol2 | -0.346 | -0.862 |
| lignocerate | -0.058 | -0.721 |
| oleate | -0.289 | -0.364 |
| phosphatidylcholine | -0.045 | -0.623 |
| acetate | -0.71 | -0.806 |
| glucAc | -0.427 | -0.808 |
| Rv0950ko | -0.069 | -0.371 |
| Rv1096ko | 0.271 | 0.277 |
| Rv3684ko | 0.102 | -0.665 |
| delta_otsA_trehalose | 1.23 | 1.396 |