Top 10 genes with highest correlation to Rv3386/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3487c/lipF | (cc=0.4515) | info on Rv3487c/lipF |
| Rv3875/esxA | (cc=0.4486) | info on Rv3875/esxA |
| Rv3516/echA19 | (cc=0.4448) | info on Rv3516/echA19 |
| Rv0891c/- | (cc=0.4383) | info on Rv0891c/- |
| Rv1509/- | (cc=0.4365) | info on Rv1509/- |
| Rv1469/ctpD | (cc=0.4363) | info on Rv1469/ctpD |
| Rv0604/lpqO | (cc=0.4227) | info on Rv0604/lpqO |
| Rv2809/- | (cc=0.4154) | info on Rv2809/- |
| Rv1757c/- | (cc=0.4153) | info on Rv1757c/- |
| Rv2481c/- | (cc=0.409) | info on Rv2481c/- |
Correlation of Rv3386/- with Rv3875/esxA
Normalized LFCs for Rv3386/-:
(description and provenance of datasets)
| Rv3386/- | Rv3875/esxA | |
| Fe_supp_jason_reseq | 1.113 | 3.792 |
| low_pH_jason_reseq | -1.218 | -0.811 |
| NO_jason_reseq | -0.711 | 0.735 |
| B6_jason_reseq | -0.029 | -0.538 |
| MHCII_jason_reseq | -0.176 | -0.34 |
| Isoniazid02 | -0.487 | -0.583 |
| Rifampicin4 | 0.91 | 0.847 |
| Ethambutol3 | 0.12 | 0.423 |
| Meropenem3 | -0.243 | -0.165 |
| Vancomycin16 | 0.058 | 0.0 |
| Rv2680_day32 | -1.645 | -1.788 |
| H37Rv_KO_MarP | 0.066 | -1.552 |
| hypoxia_3wks | -0.219 | -0.451 |
| hypoxia_6wks | -0.038 | 0.472 |
| glycerol | -0.781 | -0.385 |
| cholesterol | -0.397 | -0.276 |
| AJ | -0.2 | -0.442 |
| Bibs02 | -0.013 | -0.348 |
| Bibs02c | -0.767 | -0.399 |
| BL6 | -0.225 | 1.362 |
| BL6a | -0.489 | 0.722 |
| BXD01 | 0.245 | 0.0 |
| BXD010 | -0.159 | 0.749 |
| BXD011 | -0.383 | 0.297 |
| BXD03 | 0.444 | 0.315 |
| BXD04 | -0.284 | 1.619 |
| BXD05 | 0.246 | 0.314 |
| BXD06 | -0.307 | 0.566 |
| BXD07 | 0.353 | 0.323 |
| BXD08 | 0.618 | -0.121 |
| BXD09 | -0.01 | 0.422 |
| CAST | 0.889 | -0.439 |
| CCcont | 0.07 | 2.921 |
| DS01 | -0.96 | -0.45 |
| DS02 | -1.092 | -0.414 |
| DS04 | -0.583 | -0.177 |
| DS0c | -0.594 | -0.413 |
| GP01 | 0.278 | 0.159 |
| GP02 | 1.177 | 0.303 |
| GP0c | 0.078 | 3.367 |
| NOD | 0.714 | -0.428 |
| NZO | 0.081 | -0.38 |
| PWK | 0.347 | -0.374 |
| H37Rv_KO_CtpC | -0.401 | -0.309 |
| H37Rv_KO_CtpD | -0.541 | 0.74 |
| H37Rv_KO_Rv1272 | -0.039 | 0.753 |
| H37Rv_KO_SugABC | -1.613 | -0.189 |
| H37Rv_KO_MbtN | -0.495 | 0.166 |
| Trans05 | 0.185 | 0.109 |
| macrophage_unactivated | -0.028 | -2.875 |
| IL1 | 0.08 | -0.706 |
| Rapamycin | -0.506 | -0.598 |
| Tcell | -0.886 | -3.082 |
| GMCSF | -1.024 | -0.985 |
| IFNab | -0.469 | 0.42 |
| IFNg | -0.756 | -3.138 |
| IFNg_GMCSF1 | -0.361 | -2.863 |
| Rv1432_day32 | 1.112 | 0.0 |
| Rv1565c_day32 | 1.042 | 0.0 |
| secA2_input | -0.604 | -2.754 |
| delta_Rv3594 | -1.241 | -1.392 |
| delta_Rv3717 | -0.745 | -0.464 |
| delta_Rv3811 | -0.973 | -1.289 |
| delta_Rv0954 | -1.31 | -2.109 |
| PonA1 | -1.301 | -3.038 |
| EccD1_KO | 0.076 | -2.003 |
| EspI_KO | -0.328 | -1.161 |
| PE35_KO | -0.023 | -0.213 |
| PPE68_KO | -0.259 | -0.563 |
| glycerol2 | 0.283 | 0.893 |
| lignocerate | 0.678 | 1.976 |
| oleate | -0.136 | -2.803 |
| phosphatidylcholine | -0.104 | 1.126 |
| acetate | 0.133 | 1.248 |
| glucAc | 0.281 | 1.54 |
| Rv0950ko | 0.329 | 2.063 |
| Rv1096ko | -0.953 | 0.256 |
| Rv3684ko | -0.19 | -0.295 |
| delta_otsA_trehalose | -0.016 | 0.0 |