Top 10 genes with highest correlation to Rv3386/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3487c/lipF | (cc=0.4515) | info on Rv3487c/lipF |
| Rv3875/esxA | (cc=0.4486) | info on Rv3875/esxA |
| Rv3516/echA19 | (cc=0.4448) | info on Rv3516/echA19 |
| Rv0891c/- | (cc=0.4383) | info on Rv0891c/- |
| Rv1509/- | (cc=0.4365) | info on Rv1509/- |
| Rv1469/ctpD | (cc=0.4363) | info on Rv1469/ctpD |
| Rv0604/lpqO | (cc=0.4227) | info on Rv0604/lpqO |
| Rv2809/- | (cc=0.4154) | info on Rv2809/- |
| Rv1757c/- | (cc=0.4153) | info on Rv1757c/- |
| Rv2481c/- | (cc=0.409) | info on Rv2481c/- |
Correlation of Rv3386/- with Rv2481c/-
Normalized LFCs for Rv3386/-:
(description and provenance of datasets)
| Rv3386/- | Rv2481c/- | |
| Fe_supp_jason_reseq | 1.113 | 0.434 |
| low_pH_jason_reseq | -1.218 | -0.092 |
| NO_jason_reseq | -0.711 | -0.593 |
| B6_jason_reseq | -0.029 | -0.233 |
| MHCII_jason_reseq | -0.176 | -0.51 |
| Isoniazid02 | -0.487 | 0.351 |
| Rifampicin4 | 0.91 | 0.024 |
| Ethambutol3 | 0.12 | 0.214 |
| Meropenem3 | -0.243 | 0.055 |
| Vancomycin16 | 0.058 | 0.703 |
| Rv2680_day32 | -1.645 | 0.682 |
| H37Rv_KO_MarP | 0.066 | -0.497 |
| hypoxia_3wks | -0.219 | 0.08 |
| hypoxia_6wks | -0.038 | 0.921 |
| glycerol | -0.781 | 0.159 |
| cholesterol | -0.397 | 0.442 |
| AJ | -0.2 | 0.321 |
| Bibs02 | -0.013 | -1.599 |
| Bibs02c | -0.767 | 0.573 |
| BL6 | -0.225 | 1.853 |
| BL6a | -0.489 | 1.821 |
| BXD01 | 0.245 | 0.866 |
| BXD010 | -0.159 | 1.509 |
| BXD011 | -0.383 | 1.004 |
| BXD03 | 0.444 | 1.65 |
| BXD04 | -0.284 | 0.4 |
| BXD05 | 0.246 | 1.885 |
| BXD06 | -0.307 | 1.123 |
| BXD07 | 0.353 | 1.091 |
| BXD08 | 0.618 | 1.263 |
| BXD09 | -0.01 | 1.301 |
| CAST | 0.889 | 0.659 |
| CCcont | 0.07 | 1.896 |
| DS01 | -0.96 | -0.161 |
| DS02 | -1.092 | 0.663 |
| DS04 | -0.583 | -1.81 |
| DS0c | -0.594 | 0.347 |
| GP01 | 0.278 | 0.995 |
| GP02 | 1.177 | 1.273 |
| GP0c | 0.078 | 0.217 |
| NOD | 0.714 | 0.407 |
| NZO | 0.081 | -0.049 |
| PWK | 0.347 | 0.804 |
| H37Rv_KO_CtpC | -0.401 | 0.701 |
| H37Rv_KO_CtpD | -0.541 | -1.316 |
| H37Rv_KO_Rv1272 | -0.039 | 1.848 |
| H37Rv_KO_SugABC | -1.613 | -1.683 |
| H37Rv_KO_MbtN | -0.495 | 0.09 |
| Trans05 | 0.185 | 1.478 |
| macrophage_unactivated | -0.028 | 0.445 |
| IL1 | 0.08 | 0.478 |
| Rapamycin | -0.506 | 0.359 |
| Tcell | -0.886 | 0.342 |
| GMCSF | -1.024 | 0.19 |
| IFNab | -0.469 | 0.366 |
| IFNg | -0.756 | 0.182 |
| IFNg_GMCSF1 | -0.361 | 0.201 |
| Rv1432_day32 | 1.112 | 0.013 |
| Rv1565c_day32 | 1.042 | -0.142 |
| secA2_input | -0.604 | -0.509 |
| delta_Rv3594 | -1.241 | 0.031 |
| delta_Rv3717 | -0.745 | -1.226 |
| delta_Rv3811 | -0.973 | -0.415 |
| delta_Rv0954 | -1.31 | -0.849 |
| PonA1 | -1.301 | -0.911 |
| EccD1_KO | 0.076 | 0.635 |
| EspI_KO | -0.328 | 0.508 |
| PE35_KO | -0.023 | 0.691 |
| PPE68_KO | -0.259 | 0.781 |
| glycerol2 | 0.283 | 1.184 |
| lignocerate | 0.678 | 1.4 |
| oleate | -0.136 | 0.388 |
| phosphatidylcholine | -0.104 | 1.066 |
| acetate | 0.133 | 0.894 |
| glucAc | 0.281 | 0.948 |
| Rv0950ko | 0.329 | 0.434 |
| Rv1096ko | -0.953 | -0.163 |
| Rv3684ko | -0.19 | 0.252 |
| delta_otsA_trehalose | -0.016 | 0.873 |