Top 10 genes with highest correlation to Rv3384c/vapC46:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3860/- | (cc=0.5503) | info on Rv3860/- |
| Rv3022A/PE29 | (cc=0.4382) | info on Rv3022A/PE29 |
| Rv3798/- | (cc=0.4171) | info on Rv3798/- |
| Rv0860/fadB | (cc=0.4168) | info on Rv0860/fadB |
| Rv1225c/- | (cc=0.4107) | info on Rv1225c/- |
| Rv2812/- | (cc=0.4059) | info on Rv2812/- |
| Rv1961/- | (cc=0.4032) | info on Rv1961/- |
| Rv1878/glnA3 | (cc=0.3965) | info on Rv1878/glnA3 |
| Rv1951c/- | (cc=0.3955) | info on Rv1951c/- |
| Rv2154c/ftsW | (cc=0.3867) | info on Rv2154c/ftsW |
Correlation of Rv3384c/vapC46 with Rv1951c/-
Normalized LFCs for Rv3384c/vapC46:
(description and provenance of datasets)
| Rv3384c/vapC46 | Rv1951c/- | |
| Fe_supp_jason_reseq | -1.924 | -0.289 |
| low_pH_jason_reseq | -0.848 | -0.44 |
| NO_jason_reseq | -0.606 | -0.404 |
| B6_jason_reseq | -1.495 | -0.181 |
| MHCII_jason_reseq | -2.384 | -1.654 |
| Isoniazid02 | 0.313 | 1.107 |
| Rifampicin4 | 0.899 | 0.493 |
| Ethambutol3 | 0.624 | 0.835 |
| Meropenem3 | 0.648 | 0.46 |
| Vancomycin16 | 0.881 | 0.947 |
| Rv2680_day32 | -2.671 | -0.342 |
| H37Rv_KO_MarP | 0.667 | -0.683 |
| hypoxia_3wks | -0.65 | -0.467 |
| hypoxia_6wks | -2.334 | -0.589 |
| glycerol | -0.304 | -2.152 |
| cholesterol | 0.191 | -1.586 |
| AJ | 1.887 | 0.123 |
| Bibs02 | 1.09 | 1.854 |
| Bibs02c | -1.446 | -0.045 |
| BL6 | -1.546 | -0.79 |
| BL6a | -0.822 | 0.063 |
| BXD01 | -1.54 | -0.504 |
| BXD010 | -0.817 | 0.041 |
| BXD011 | -0.937 | 0.707 |
| BXD03 | 0.418 | -0.523 |
| BXD04 | -0.322 | -0.04 |
| BXD05 | 0.529 | -1.434 |
| BXD06 | -0.246 | 0.0 |
| BXD07 | 0.083 | -0.558 |
| BXD08 | -0.142 | -0.414 |
| BXD09 | 0.206 | 0.762 |
| CAST | -0.551 | -0.619 |
| CCcont | -0.087 | -0.243 |
| DS01 | 0.448 | -0.077 |
| DS02 | -0.4 | -0.047 |
| DS04 | -2.363 | 0.465 |
| DS0c | -0.726 | -1.413 |
| GP01 | 0.377 | 1.517 |
| GP02 | 0.404 | 1.203 |
| GP0c | 0.0 | 0.721 |
| NOD | -1.704 | -1.375 |
| NZO | 1.098 | -1.423 |
| PWK | 0.686 | -1.317 |
| H37Rv_KO_CtpC | 1.131 | 0.599 |
| H37Rv_KO_CtpD | -0.276 | 0.142 |
| H37Rv_KO_Rv1272 | 0.5 | 1.985 |
| H37Rv_KO_SugABC | 0.808 | 0.617 |
| H37Rv_KO_MbtN | 1.899 | 2.48 |
| Trans05 | -0.932 | 1.016 |
| macrophage_unactivated | 0.401 | 0.189 |
| IL1 | -0.656 | -0.759 |
| Rapamycin | 0.083 | -0.313 |
| Tcell | -0.85 | -0.081 |
| GMCSF | 0.634 | -0.56 |
| IFNab | 0.23 | -0.556 |
| IFNg | 0.802 | 1.034 |
| IFNg_GMCSF1 | -0.053 | -1.502 |
| Rv1432_day32 | -0.065 | 0.416 |
| Rv1565c_day32 | -0.599 | 0.787 |
| secA2_input | -0.728 | -2.404 |
| delta_Rv3594 | 0.665 | 1.826 |
| delta_Rv3717 | 0.437 | 1.048 |
| delta_Rv3811 | 1.132 | 1.851 |
| delta_Rv0954 | -0.222 | 1.531 |
| PonA1 | -1.07 | 1.243 |
| EccD1_KO | 0.77 | 0.26 |
| EspI_KO | 0.896 | -1.141 |
| PE35_KO | 0.335 | -0.172 |
| PPE68_KO | 0.086 | 1.616 |
| glycerol2 | -1.77 | -0.57 |
| lignocerate | 0.223 | 0.595 |
| oleate | -3.424 | -2.142 |
| phosphatidylcholine | -0.95 | -0.265 |
| acetate | 0.261 | 0.352 |
| glucAc | 0.216 | 0.56 |
| Rv0950ko | -0.929 | 1.107 |
| Rv1096ko | -1.285 | 0.151 |
| Rv3684ko | -1.205 | -0.619 |
| delta_otsA_trehalose | -1.541 | -0.387 |