Top 10 genes with highest correlation to Rv3349c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5003) | info on Rv3103c/- |
| Rv3803c/fbpD | (cc=0.477) | info on Rv3803c/fbpD |
| Rv0526/- | (cc=0.4531) | info on Rv0526/- |
| Rv2718c/nrdR | (cc=0.4478) | info on Rv2718c/nrdR |
| Rv0320/- | (cc=0.4351) | info on Rv0320/- |
| Rv3249c/- | (cc=0.4346) | info on Rv3249c/- |
| Rv0392c/ndhA | (cc=0.4198) | info on Rv0392c/ndhA |
| Rv1363c/- | (cc=0.4139) | info on Rv1363c/- |
| Rv0078/- | (cc=0.4041) | info on Rv0078/- |
| Rv1839c/vapB13 | (cc=0.3996) | info on Rv1839c/vapB13 |
Correlation of Rv3349c/- with Rv3803c/fbpD
Normalized LFCs for Rv3349c/-:
(description and provenance of datasets)
| Rv3349c/- | Rv3803c/fbpD | |
| Fe_supp_jason_reseq | 0.333 | 0.557 |
| low_pH_jason_reseq | -0.294 | -0.35 |
| NO_jason_reseq | -1.659 | -2.237 |
| B6_jason_reseq | 0.516 | -0.208 |
| MHCII_jason_reseq | 0.083 | -0.733 |
| Isoniazid02 | 0.06 | 0.604 |
| Rifampicin4 | 0.412 | -0.59 |
| Ethambutol3 | 0.085 | 0.666 |
| Meropenem3 | 0.875 | -0.685 |
| Vancomycin16 | -0.162 | -0.326 |
| Rv2680_day32 | 0.819 | -0.599 |
| H37Rv_KO_MarP | 0.093 | 0.382 |
| hypoxia_3wks | 0.762 | 0.191 |
| hypoxia_6wks | 0.555 | 0.1 |
| glycerol | -0.092 | -1.701 |
| cholesterol | 2.255 | -0.293 |
| AJ | 0.709 | -0.682 |
| Bibs02 | 1.681 | 0.117 |
| Bibs02c | 0.299 | 0.147 |
| BL6 | -1.566 | -0.673 |
| BL6a | 0.375 | -0.37 |
| BXD01 | -0.536 | -0.008 |
| BXD010 | -1.117 | 0.025 |
| BXD011 | -0.375 | -0.15 |
| BXD03 | -0.223 | 0.035 |
| BXD04 | -0.183 | 0.016 |
| BXD05 | 0.046 | 0.28 |
| BXD06 | -0.102 | 0.094 |
| BXD07 | -0.611 | -0.686 |
| BXD08 | -1.541 | -0.249 |
| BXD09 | -0.432 | -0.319 |
| CAST | 0.687 | -0.157 |
| CCcont | -0.571 | -0.854 |
| DS01 | 0.135 | -0.866 |
| DS02 | -0.334 | -1.397 |
| DS04 | -1.008 | -0.077 |
| DS0c | 0.374 | 0.0 |
| GP01 | -1.285 | -1.214 |
| GP02 | -1.7 | 0.31 |
| GP0c | -0.751 | -0.144 |
| NOD | -0.161 | -0.641 |
| NZO | -1.546 | 0.488 |
| PWK | -0.01 | -0.972 |
| H37Rv_KO_CtpC | -0.125 | 0.173 |
| H37Rv_KO_CtpD | -0.077 | 0.186 |
| H37Rv_KO_Rv1272 | 1.673 | 1.085 |
| H37Rv_KO_SugABC | -1.676 | 0.117 |
| H37Rv_KO_MbtN | 1.389 | 0.426 |
| Trans05 | -0.428 | 0.579 |
| macrophage_unactivated | -0.17 | 0.631 |
| IL1 | 1.489 | 0.392 |
| Rapamycin | 1.623 | -0.144 |
| Tcell | -0.375 | 0.244 |
| GMCSF | 0.264 | 0.668 |
| IFNab | 0.837 | 0.565 |
| IFNg | 0.826 | 0.711 |
| IFNg_GMCSF1 | 0.823 | 1.068 |
| Rv1432_day32 | 0.465 | 1.124 |
| Rv1565c_day32 | -0.592 | -1.406 |
| secA2_input | 0.665 | 0.283 |
| delta_Rv3594 | -0.999 | -0.02 |
| delta_Rv3717 | 0.18 | 0.284 |
| delta_Rv3811 | 0.326 | -0.049 |
| delta_Rv0954 | 0.218 | 0.469 |
| PonA1 | -0.16 | -0.519 |
| EccD1_KO | -0.74 | -0.51 |
| EspI_KO | -0.411 | -1.084 |
| PE35_KO | -0.105 | 0.085 |
| PPE68_KO | 0.176 | -0.621 |
| glycerol2 | -2.385 | -2.708 |
| lignocerate | -2.03 | -2.25 |
| oleate | -1.511 | -0.204 |
| phosphatidylcholine | -1.724 | -0.943 |
| acetate | -1.458 | -0.627 |
| glucAc | -0.98 | -1.378 |
| Rv0950ko | 0.078 | 0.166 |
| Rv1096ko | -0.86 | -0.938 |
| Rv3684ko | -0.386 | 0.023 |
| delta_otsA_trehalose | -0.431 | -0.137 |