Top 10 genes with highest correlation to Rv3349c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5003) | info on Rv3103c/- |
| Rv3803c/fbpD | (cc=0.477) | info on Rv3803c/fbpD |
| Rv0526/- | (cc=0.4531) | info on Rv0526/- |
| Rv2718c/nrdR | (cc=0.4478) | info on Rv2718c/nrdR |
| Rv0320/- | (cc=0.4351) | info on Rv0320/- |
| Rv3249c/- | (cc=0.4346) | info on Rv3249c/- |
| Rv0392c/ndhA | (cc=0.4198) | info on Rv0392c/ndhA |
| Rv1363c/- | (cc=0.4139) | info on Rv1363c/- |
| Rv0078/- | (cc=0.4041) | info on Rv0078/- |
| Rv1839c/vapB13 | (cc=0.3996) | info on Rv1839c/vapB13 |
Correlation of Rv3349c/- with Rv0392c/ndhA
Normalized LFCs for Rv3349c/-:
(description and provenance of datasets)
| Rv3349c/- | Rv0392c/ndhA | |
| Fe_supp_jason_reseq | 0.333 | 1.659 |
| low_pH_jason_reseq | -0.294 | 1.541 |
| NO_jason_reseq | -1.659 | -0.914 |
| B6_jason_reseq | 0.516 | -1.228 |
| MHCII_jason_reseq | 0.083 | 0.9 |
| Isoniazid02 | 0.06 | 0.3 |
| Rifampicin4 | 0.412 | 0.75 |
| Ethambutol3 | 0.085 | 1.085 |
| Meropenem3 | 0.875 | 0.438 |
| Vancomycin16 | -0.162 | 0.385 |
| Rv2680_day32 | 0.819 | 0.0 |
| H37Rv_KO_MarP | 0.093 | -0.326 |
| hypoxia_3wks | 0.762 | -0.475 |
| hypoxia_6wks | 0.555 | -1.261 |
| glycerol | -0.092 | 1.336 |
| cholesterol | 2.255 | 1.485 |
| AJ | 0.709 | 0.637 |
| Bibs02 | 1.681 | 1.14 |
| Bibs02c | 0.299 | 1.005 |
| BL6 | -1.566 | -1.093 |
| BL6a | 0.375 | -0.106 |
| BXD01 | -0.536 | 0.322 |
| BXD010 | -1.117 | -0.385 |
| BXD011 | -0.375 | -0.412 |
| BXD03 | -0.223 | -0.98 |
| BXD04 | -0.183 | -0.772 |
| BXD05 | 0.046 | -0.68 |
| BXD06 | -0.102 | -0.531 |
| BXD07 | -0.611 | -0.517 |
| BXD08 | -1.541 | -0.918 |
| BXD09 | -0.432 | -0.155 |
| CAST | 0.687 | -0.976 |
| CCcont | -0.571 | 0.306 |
| DS01 | 0.135 | 1.627 |
| DS02 | -0.334 | 0.871 |
| DS04 | -1.008 | 0.453 |
| DS0c | 0.374 | 1.571 |
| GP01 | -1.285 | -0.617 |
| GP02 | -1.7 | 0.624 |
| GP0c | -0.751 | -0.169 |
| NOD | -0.161 | -0.381 |
| NZO | -1.546 | -0.071 |
| PWK | -0.01 | -1.637 |
| H37Rv_KO_CtpC | -0.125 | -0.606 |
| H37Rv_KO_CtpD | -0.077 | 1.15 |
| H37Rv_KO_Rv1272 | 1.673 | 0.072 |
| H37Rv_KO_SugABC | -1.676 | 0.465 |
| H37Rv_KO_MbtN | 1.389 | 1.096 |
| Trans05 | -0.428 | -0.393 |
| macrophage_unactivated | -0.17 | 0.672 |
| IL1 | 1.489 | -0.629 |
| Rapamycin | 1.623 | -0.534 |
| Tcell | -0.375 | -0.332 |
| GMCSF | 0.264 | -0.766 |
| IFNab | 0.837 | 0.381 |
| IFNg | 0.826 | -1.478 |
| IFNg_GMCSF1 | 0.823 | -1.037 |
| Rv1432_day32 | 0.465 | 2.654 |
| Rv1565c_day32 | -0.592 | 1.27 |
| secA2_input | 0.665 | -0.086 |
| delta_Rv3594 | -0.999 | 0.613 |
| delta_Rv3717 | 0.18 | 0.14 |
| delta_Rv3811 | 0.326 | 0.955 |
| delta_Rv0954 | 0.218 | 1.255 |
| PonA1 | -0.16 | 1.138 |
| EccD1_KO | -0.74 | -0.849 |
| EspI_KO | -0.411 | -1.161 |
| PE35_KO | -0.105 | -0.592 |
| PPE68_KO | 0.176 | -0.691 |
| glycerol2 | -2.385 | -4.603 |
| lignocerate | -2.03 | -4.0 |
| oleate | -1.511 | -4.657 |
| phosphatidylcholine | -1.724 | -4.969 |
| acetate | -1.458 | -0.55 |
| glucAc | -0.98 | -0.664 |
| Rv0950ko | 0.078 | 1.511 |
| Rv1096ko | -0.86 | 1.559 |
| Rv3684ko | -0.386 | 1.379 |
| delta_otsA_trehalose | -0.431 | 0.0 |