Top 10 genes with highest correlation to Rv3349c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3103c/- | (cc=0.5003) | info on Rv3103c/- |
| Rv3803c/fbpD | (cc=0.477) | info on Rv3803c/fbpD |
| Rv0526/- | (cc=0.4531) | info on Rv0526/- |
| Rv2718c/nrdR | (cc=0.4478) | info on Rv2718c/nrdR |
| Rv0320/- | (cc=0.4351) | info on Rv0320/- |
| Rv3249c/- | (cc=0.4346) | info on Rv3249c/- |
| Rv0392c/ndhA | (cc=0.4198) | info on Rv0392c/ndhA |
| Rv1363c/- | (cc=0.4139) | info on Rv1363c/- |
| Rv0078/- | (cc=0.4041) | info on Rv0078/- |
| Rv1839c/vapB13 | (cc=0.3996) | info on Rv1839c/vapB13 |
Correlation of Rv3349c/- with Rv3103c/-
Normalized LFCs for Rv3349c/-:
(description and provenance of datasets)
| Rv3349c/- | Rv3103c/- | |
| Fe_supp_jason_reseq | 0.333 | 0.3 |
| low_pH_jason_reseq | -0.294 | 0.412 |
| NO_jason_reseq | -1.659 | 0.184 |
| B6_jason_reseq | 0.516 | 0.772 |
| MHCII_jason_reseq | 0.083 | 0.842 |
| Isoniazid02 | 0.06 | 0.566 |
| Rifampicin4 | 0.412 | -0.206 |
| Ethambutol3 | 0.085 | -0.3 |
| Meropenem3 | 0.875 | 0.962 |
| Vancomycin16 | -0.162 | -0.011 |
| Rv2680_day32 | 0.819 | -0.525 |
| H37Rv_KO_MarP | 0.093 | 0.188 |
| hypoxia_3wks | 0.762 | 1.025 |
| hypoxia_6wks | 0.555 | 0.848 |
| glycerol | -0.092 | -0.2 |
| cholesterol | 2.255 | 0.648 |
| AJ | 0.709 | -0.38 |
| Bibs02 | 1.681 | -0.142 |
| Bibs02c | 0.299 | 0.684 |
| BL6 | -1.566 | -0.799 |
| BL6a | 0.375 | 0.245 |
| BXD01 | -0.536 | -0.309 |
| BXD010 | -1.117 | -0.193 |
| BXD011 | -0.375 | 0.311 |
| BXD03 | -0.223 | 0.057 |
| BXD04 | -0.183 | -0.39 |
| BXD05 | 0.046 | -0.271 |
| BXD06 | -0.102 | -0.246 |
| BXD07 | -0.611 | -0.177 |
| BXD08 | -1.541 | -0.296 |
| BXD09 | -0.432 | -0.212 |
| CAST | 0.687 | 0.472 |
| CCcont | -0.571 | -1.069 |
| DS01 | 0.135 | 0.66 |
| DS02 | -0.334 | 0.367 |
| DS04 | -1.008 | 0.547 |
| DS0c | 0.374 | -0.025 |
| GP01 | -1.285 | -1.468 |
| GP02 | -1.7 | -2.064 |
| GP0c | -0.751 | -2.029 |
| NOD | -0.161 | 0.748 |
| NZO | -1.546 | 0.105 |
| PWK | -0.01 | -0.472 |
| H37Rv_KO_CtpC | -0.125 | -0.228 |
| H37Rv_KO_CtpD | -0.077 | 0.872 |
| H37Rv_KO_Rv1272 | 1.673 | 0.522 |
| H37Rv_KO_SugABC | -1.676 | -1.29 |
| H37Rv_KO_MbtN | 1.389 | 0.189 |
| Trans05 | -0.428 | 0.604 |
| macrophage_unactivated | -0.17 | -0.294 |
| IL1 | 1.489 | -0.498 |
| Rapamycin | 1.623 | -0.101 |
| Tcell | -0.375 | -0.955 |
| GMCSF | 0.264 | 0.879 |
| IFNab | 0.837 | -0.372 |
| IFNg | 0.826 | 0.043 |
| IFNg_GMCSF1 | 0.823 | -0.264 |
| Rv1432_day32 | 0.465 | 1.173 |
| Rv1565c_day32 | -0.592 | -1.554 |
| secA2_input | 0.665 | 1.59 |
| delta_Rv3594 | -0.999 | -0.476 |
| delta_Rv3717 | 0.18 | 0.299 |
| delta_Rv3811 | 0.326 | -0.486 |
| delta_Rv0954 | 0.218 | -0.41 |
| PonA1 | -0.16 | 0.478 |
| EccD1_KO | -0.74 | -0.562 |
| EspI_KO | -0.411 | 0.465 |
| PE35_KO | -0.105 | -0.438 |
| PPE68_KO | 0.176 | -1.014 |
| glycerol2 | -2.385 | -0.958 |
| lignocerate | -2.03 | -1.277 |
| oleate | -1.511 | -0.839 |
| phosphatidylcholine | -1.724 | -0.903 |
| acetate | -1.458 | -1.33 |
| glucAc | -0.98 | -1.291 |
| Rv0950ko | 0.078 | 0.476 |
| Rv1096ko | -0.86 | -0.024 |
| Rv3684ko | -0.386 | 0.485 |
| delta_otsA_trehalose | -0.431 | 0.437 |