Top 10 genes with highest correlation to Rv3333c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2961/- | (cc=0.543) | info on Rv2961/- |
| Rv1653/argJ | (cc=0.5052) | info on Rv1653/argJ |
| Rv2915c/- | (cc=0.4767) | info on Rv2915c/- |
| Rv2380c/mbtE | (cc=0.4588) | info on Rv2380c/mbtE |
| Rv3453/- | (cc=0.4505) | info on Rv3453/- |
| Rv1541c/lprI | (cc=0.4473) | info on Rv1541c/lprI |
| Rv2282c/- | (cc=0.4364) | info on Rv2282c/- |
| Rv2517c/- | (cc=0.4361) | info on Rv2517c/- |
| Rv3471c/- | (cc=0.4359) | info on Rv3471c/- |
| Rv1704c/cycA | (cc=0.4346) | info on Rv1704c/cycA |
Correlation of Rv3333c/- with Rv3471c/-
Normalized LFCs for Rv3333c/-:
(description and provenance of datasets)
| Rv3333c/- | Rv3471c/- | |
| Fe_supp_jason_reseq | -0.335 | -1.039 |
| low_pH_jason_reseq | -0.44 | 0.458 |
| NO_jason_reseq | -0.116 | 0.701 |
| B6_jason_reseq | 0.649 | 0.733 |
| MHCII_jason_reseq | 0.803 | 0.702 |
| Isoniazid02 | 1.251 | 0.029 |
| Rifampicin4 | -0.528 | -0.141 |
| Ethambutol3 | -0.742 | 1.375 |
| Meropenem3 | -0.373 | 0.184 |
| Vancomycin16 | -0.231 | -0.645 |
| Rv2680_day32 | -1.104 | -0.576 |
| H37Rv_KO_MarP | 0.457 | 0.25 |
| hypoxia_3wks | -0.024 | 0.339 |
| hypoxia_6wks | -0.163 | -1.094 |
| glycerol | 0.303 | 0.584 |
| cholesterol | 0.411 | -0.519 |
| AJ | 0.449 | 0.619 |
| Bibs02 | -0.048 | 1.052 |
| Bibs02c | 0.741 | 0.611 |
| BL6 | -0.081 | -1.711 |
| BL6a | -0.207 | -0.103 |
| BXD01 | -0.736 | -1.823 |
| BXD010 | 0.005 | -0.834 |
| BXD011 | -0.332 | -1.306 |
| BXD03 | -0.926 | -2.321 |
| BXD04 | -0.329 | -2.531 |
| BXD05 | -0.327 | -1.95 |
| BXD06 | -0.139 | -0.818 |
| BXD07 | -0.483 | -1.567 |
| BXD08 | -0.425 | -1.758 |
| BXD09 | -0.572 | -2.295 |
| CAST | 0.736 | -0.058 |
| CCcont | -0.825 | -3.101 |
| DS01 | 0.421 | 1.381 |
| DS02 | 0.753 | 1.063 |
| DS04 | 0.758 | 1.831 |
| DS0c | -0.27 | 1.299 |
| GP01 | -0.564 | -1.785 |
| GP02 | 0.042 | -1.78 |
| GP0c | -0.573 | -0.888 |
| NOD | 1.295 | -0.713 |
| NZO | 0.665 | -0.316 |
| PWK | 0.085 | 0.45 |
| H37Rv_KO_CtpC | -0.401 | -0.434 |
| H37Rv_KO_CtpD | -0.255 | 0.744 |
| H37Rv_KO_Rv1272 | -0.719 | -0.565 |
| H37Rv_KO_SugABC | -0.119 | 0.741 |
| H37Rv_KO_MbtN | 0.24 | 1.908 |
| Trans05 | -0.263 | -0.157 |
| macrophage_unactivated | 0.448 | 0.379 |
| IL1 | 0.095 | -0.095 |
| Rapamycin | 0.215 | -0.35 |
| Tcell | -0.108 | -1.284 |
| GMCSF | 0.884 | -0.679 |
| IFNab | -0.411 | -0.949 |
| IFNg | 0.12 | 0.043 |
| IFNg_GMCSF1 | 0.801 | 0.556 |
| Rv1432_day32 | 1.57 | 1.237 |
| Rv1565c_day32 | -0.722 | -1.099 |
| secA2_input | -0.31 | -0.085 |
| delta_Rv3594 | -0.587 | 0.153 |
| delta_Rv3717 | -0.188 | 0.033 |
| delta_Rv3811 | -0.882 | -1.5 |
| delta_Rv0954 | -0.238 | -0.14 |
| PonA1 | -0.34 | 0.179 |
| EccD1_KO | 0.128 | 0.082 |
| EspI_KO | 0.861 | 0.385 |
| PE35_KO | 1.59 | -0.023 |
| PPE68_KO | 1.069 | 0.054 |
| glycerol2 | 0.147 | -0.963 |
| lignocerate | -0.149 | -0.634 |
| oleate | 0.641 | -0.373 |
| phosphatidylcholine | 0.322 | -0.686 |
| acetate | -0.347 | -0.667 |
| glucAc | -0.126 | -0.415 |
| Rv0950ko | -0.395 | -0.184 |
| Rv1096ko | -0.241 | 0.027 |
| Rv3684ko | -0.105 | -0.724 |
| delta_otsA_trehalose | -1.089 | 0.289 |