Top 10 genes with highest correlation to Rv3333c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2961/- | (cc=0.543) | info on Rv2961/- |
| Rv1653/argJ | (cc=0.5052) | info on Rv1653/argJ |
| Rv2915c/- | (cc=0.4767) | info on Rv2915c/- |
| Rv2380c/mbtE | (cc=0.4588) | info on Rv2380c/mbtE |
| Rv3453/- | (cc=0.4505) | info on Rv3453/- |
| Rv1541c/lprI | (cc=0.4473) | info on Rv1541c/lprI |
| Rv2282c/- | (cc=0.4364) | info on Rv2282c/- |
| Rv2517c/- | (cc=0.4361) | info on Rv2517c/- |
| Rv3471c/- | (cc=0.4359) | info on Rv3471c/- |
| Rv1704c/cycA | (cc=0.4346) | info on Rv1704c/cycA |
Correlation of Rv3333c/- with Rv2380c/mbtE
Normalized LFCs for Rv3333c/-:
(description and provenance of datasets)
| Rv3333c/- | Rv2380c/mbtE | |
| Fe_supp_jason_reseq | -0.335 | 0.863 |
| low_pH_jason_reseq | -0.44 | 0.647 |
| NO_jason_reseq | -0.116 | -0.302 |
| B6_jason_reseq | 0.649 | -0.421 |
| MHCII_jason_reseq | 0.803 | -0.37 |
| Isoniazid02 | 1.251 | 0.493 |
| Rifampicin4 | -0.528 | 0.379 |
| Ethambutol3 | -0.742 | -0.073 |
| Meropenem3 | -0.373 | -0.533 |
| Vancomycin16 | -0.231 | -0.08 |
| Rv2680_day32 | -1.104 | -1.96 |
| H37Rv_KO_MarP | 0.457 | 1.04 |
| hypoxia_3wks | -0.024 | -1.782 |
| hypoxia_6wks | -0.163 | -1.222 |
| glycerol | 0.303 | 0.607 |
| cholesterol | 0.411 | 0.371 |
| AJ | 0.449 | -0.788 |
| Bibs02 | -0.048 | -0.94 |
| Bibs02c | 0.741 | -0.887 |
| BL6 | -0.081 | -0.768 |
| BL6a | -0.207 | -0.839 |
| BXD01 | -0.736 | -0.8 |
| BXD010 | 0.005 | -0.659 |
| BXD011 | -0.332 | -0.54 |
| BXD03 | -0.926 | -0.695 |
| BXD04 | -0.329 | -0.76 |
| BXD05 | -0.327 | -0.827 |
| BXD06 | -0.139 | -0.566 |
| BXD07 | -0.483 | -0.851 |
| BXD08 | -0.425 | -0.817 |
| BXD09 | -0.572 | -0.863 |
| CAST | 0.736 | 0.0 |
| CCcont | -0.825 | -0.285 |
| DS01 | 0.421 | 2.522 |
| DS02 | 0.753 | 0.837 |
| DS04 | 0.758 | 0.967 |
| DS0c | -0.27 | 0.0 |
| GP01 | -0.564 | -0.607 |
| GP02 | 0.042 | -0.511 |
| GP0c | -0.573 | -0.799 |
| NOD | 1.295 | 0.0 |
| NZO | 0.665 | -0.678 |
| PWK | 0.085 | -0.516 |
| H37Rv_KO_CtpC | -0.401 | -0.2 |
| H37Rv_KO_CtpD | -0.255 | -0.333 |
| H37Rv_KO_Rv1272 | -0.719 | -0.866 |
| H37Rv_KO_SugABC | -0.119 | -0.42 |
| H37Rv_KO_MbtN | 0.24 | -0.53 |
| Trans05 | -0.263 | -0.803 |
| macrophage_unactivated | 0.448 | 0.83 |
| IL1 | 0.095 | 0.0 |
| Rapamycin | 0.215 | 0.0 |
| Tcell | -0.108 | 1.235 |
| GMCSF | 0.884 | 0.0 |
| IFNab | -0.411 | 0.0 |
| IFNg | 0.12 | 0.0 |
| IFNg_GMCSF1 | 0.801 | 0.434 |
| Rv1432_day32 | 1.57 | -0.18 |
| Rv1565c_day32 | -0.722 | 0.0 |
| secA2_input | -0.31 | 1.005 |
| delta_Rv3594 | -0.587 | -0.635 |
| delta_Rv3717 | -0.188 | -0.522 |
| delta_Rv3811 | -0.882 | -0.617 |
| delta_Rv0954 | -0.238 | 0.0 |
| PonA1 | -0.34 | 0.971 |
| EccD1_KO | 0.128 | 1.365 |
| EspI_KO | 0.861 | 0.719 |
| PE35_KO | 1.59 | 2.383 |
| PPE68_KO | 1.069 | 2.086 |
| glycerol2 | 0.147 | 0.0 |
| lignocerate | -0.149 | 0.0 |
| oleate | 0.641 | 0.0 |
| phosphatidylcholine | 0.322 | 0.122 |
| acetate | -0.347 | 0.412 |
| glucAc | -0.126 | 0.256 |
| Rv0950ko | -0.395 | 0.0 |
| Rv1096ko | -0.241 | 0.561 |
| Rv3684ko | -0.105 | 0.465 |
| delta_otsA_trehalose | -1.089 | -1.258 |