Top 10 genes with highest correlation to Rv3333c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2961/- | (cc=0.543) | info on Rv2961/- |
| Rv1653/argJ | (cc=0.5052) | info on Rv1653/argJ |
| Rv2915c/- | (cc=0.4767) | info on Rv2915c/- |
| Rv2380c/mbtE | (cc=0.4588) | info on Rv2380c/mbtE |
| Rv3453/- | (cc=0.4505) | info on Rv3453/- |
| Rv1541c/lprI | (cc=0.4473) | info on Rv1541c/lprI |
| Rv2282c/- | (cc=0.4364) | info on Rv2282c/- |
| Rv2517c/- | (cc=0.4361) | info on Rv2517c/- |
| Rv3471c/- | (cc=0.4359) | info on Rv3471c/- |
| Rv1704c/cycA | (cc=0.4346) | info on Rv1704c/cycA |
Correlation of Rv3333c/- with Rv2282c/-
Normalized LFCs for Rv3333c/-:
(description and provenance of datasets)
| Rv3333c/- | Rv2282c/- | |
| Fe_supp_jason_reseq | -0.335 | -0.358 |
| low_pH_jason_reseq | -0.44 | -0.102 |
| NO_jason_reseq | -0.116 | 0.515 |
| B6_jason_reseq | 0.649 | 2.098 |
| MHCII_jason_reseq | 0.803 | 1.597 |
| Isoniazid02 | 1.251 | 0.629 |
| Rifampicin4 | -0.528 | 0.834 |
| Ethambutol3 | -0.742 | 0.375 |
| Meropenem3 | -0.373 | 0.132 |
| Vancomycin16 | -0.231 | 0.669 |
| Rv2680_day32 | -1.104 | -0.683 |
| H37Rv_KO_MarP | 0.457 | -0.364 |
| hypoxia_3wks | -0.024 | 0.482 |
| hypoxia_6wks | -0.163 | 0.253 |
| glycerol | 0.303 | -1.336 |
| cholesterol | 0.411 | -0.545 |
| AJ | 0.449 | -0.632 |
| Bibs02 | -0.048 | -0.233 |
| Bibs02c | 0.741 | 0.0 |
| BL6 | -0.081 | -1.812 |
| BL6a | -0.207 | -0.839 |
| BXD01 | -0.736 | -0.686 |
| BXD010 | 0.005 | -1.313 |
| BXD011 | -0.332 | -0.603 |
| BXD03 | -0.926 | -1.237 |
| BXD04 | -0.329 | -1.268 |
| BXD05 | -0.327 | -0.661 |
| BXD06 | -0.139 | -1.121 |
| BXD07 | -0.483 | -0.888 |
| BXD08 | -0.425 | -0.17 |
| BXD09 | -0.572 | -1.249 |
| CAST | 0.736 | 1.074 |
| CCcont | -0.825 | -1.715 |
| DS01 | 0.421 | 0.467 |
| DS02 | 0.753 | -0.072 |
| DS04 | 0.758 | 1.373 |
| DS0c | -0.27 | -0.357 |
| GP01 | -0.564 | -0.673 |
| GP02 | 0.042 | -1.614 |
| GP0c | -0.573 | -1.493 |
| NOD | 1.295 | 0.711 |
| NZO | 0.665 | -0.718 |
| PWK | 0.085 | 0.021 |
| H37Rv_KO_CtpC | -0.401 | -0.353 |
| H37Rv_KO_CtpD | -0.255 | -1.414 |
| H37Rv_KO_Rv1272 | -0.719 | 0.329 |
| H37Rv_KO_SugABC | -0.119 | -1.574 |
| H37Rv_KO_MbtN | 0.24 | -1.999 |
| Trans05 | -0.263 | -0.811 |
| macrophage_unactivated | 0.448 | -0.35 |
| IL1 | 0.095 | -0.593 |
| Rapamycin | 0.215 | -2.179 |
| Tcell | -0.108 | -0.176 |
| GMCSF | 0.884 | 0.647 |
| IFNab | -0.411 | -0.795 |
| IFNg | 0.12 | -0.374 |
| IFNg_GMCSF1 | 0.801 | -0.258 |
| Rv1432_day32 | 1.57 | -0.164 |
| Rv1565c_day32 | -0.722 | 0.924 |
| secA2_input | -0.31 | -2.677 |
| delta_Rv3594 | -0.587 | 0.205 |
| delta_Rv3717 | -0.188 | -0.287 |
| delta_Rv3811 | -0.882 | -0.164 |
| delta_Rv0954 | -0.238 | -0.349 |
| PonA1 | -0.34 | 0.192 |
| EccD1_KO | 0.128 | 0.595 |
| EspI_KO | 0.861 | 0.973 |
| PE35_KO | 1.59 | 2.395 |
| PPE68_KO | 1.069 | 2.265 |
| glycerol2 | 0.147 | -0.731 |
| lignocerate | -0.149 | -0.13 |
| oleate | 0.641 | -0.074 |
| phosphatidylcholine | 0.322 | -0.354 |
| acetate | -0.347 | 0.394 |
| glucAc | -0.126 | 0.103 |
| Rv0950ko | -0.395 | -1.188 |
| Rv1096ko | -0.241 | 0.856 |
| Rv3684ko | -0.105 | 0.298 |
| delta_otsA_trehalose | -1.089 | -1.239 |