Top 10 genes with highest correlation to Rv3320c/vapC44:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0701/rplC | (cc=0.6004) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.5433) | info on Rv3673c/- |
| Rv0183/- | (cc=0.48) | info on Rv0183/- |
| Rv2882c/frr | (cc=0.4674) | info on Rv2882c/frr |
| Rv3842c/glpQ1 | (cc=0.4637) | info on Rv3842c/glpQ1 |
| Rv0425c/ctpH | (cc=0.4631) | info on Rv0425c/ctpH |
| Rv1564c/treX | (cc=0.4508) | info on Rv1564c/treX |
| Rv0364/- | (cc=0.4445) | info on Rv0364/- |
| Rv0181c/- | (cc=0.432) | info on Rv0181c/- |
| Rv0021c/- | (cc=0.4289) | info on Rv0021c/- |
Correlation of Rv3320c/vapC44 with Rv0364/-
Normalized LFCs for Rv3320c/vapC44:
(description and provenance of datasets)
| Rv3320c/vapC44 | Rv0364/- | |
| Fe_supp_jason_reseq | -2.062 | 0.227 |
| low_pH_jason_reseq | 0.087 | 0.124 |
| NO_jason_reseq | 0.591 | 0.557 |
| B6_jason_reseq | -0.023 | -0.736 |
| MHCII_jason_reseq | -1.154 | -0.905 |
| Isoniazid02 | -0.106 | -0.097 |
| Rifampicin4 | 0.574 | -0.374 |
| Ethambutol3 | -0.107 | -0.793 |
| Meropenem3 | -0.017 | -0.165 |
| Vancomycin16 | 0.292 | -0.562 |
| Rv2680_day32 | 1.796 | 2.062 |
| H37Rv_KO_MarP | -0.397 | -0.906 |
| hypoxia_3wks | -0.219 | -0.427 |
| hypoxia_6wks | -0.132 | 0.106 |
| glycerol | 1.131 | -0.136 |
| cholesterol | 0.192 | 0.0 |
| AJ | 0.64 | 0.146 |
| Bibs02 | -0.372 | 0.927 |
| Bibs02c | -1.426 | -1.028 |
| BL6 | 3.306 | 0.53 |
| BL6a | 0.674 | 0.562 |
| BXD01 | 0.504 | 0.856 |
| BXD010 | -0.101 | -0.278 |
| BXD011 | 0.799 | 1.463 |
| BXD03 | 0.493 | 0.84 |
| BXD04 | 1.13 | 0.288 |
| BXD05 | 1.053 | 1.018 |
| BXD06 | 0.974 | 1.411 |
| BXD07 | 1.265 | 0.861 |
| BXD08 | 0.014 | 0.963 |
| BXD09 | 1.056 | 1.417 |
| CAST | 0.874 | -0.155 |
| CCcont | 0.937 | 1.35 |
| DS01 | -0.85 | -0.159 |
| DS02 | -0.331 | 1.966 |
| DS04 | -1.244 | -0.583 |
| DS0c | -0.146 | -0.85 |
| GP01 | 0.508 | 0.777 |
| GP02 | -0.603 | -0.25 |
| GP0c | -0.15 | 0.369 |
| NOD | 0.21 | 1.699 |
| NZO | -0.845 | -0.134 |
| PWK | -0.155 | 0.915 |
| H37Rv_KO_CtpC | -1.486 | 0.379 |
| H37Rv_KO_CtpD | -1.414 | -0.496 |
| H37Rv_KO_Rv1272 | -1.574 | 0.4 |
| H37Rv_KO_SugABC | 0.073 | -0.298 |
| H37Rv_KO_MbtN | -2.074 | 0.959 |
| Trans05 | 0.028 | 0.371 |
| macrophage_unactivated | -0.698 | 0.164 |
| IL1 | 0.433 | -0.329 |
| Rapamycin | 0.709 | 0.316 |
| Tcell | -0.215 | 1.352 |
| GMCSF | -0.584 | -0.779 |
| IFNab | -0.925 | 0.311 |
| IFNg | -0.267 | -0.617 |
| IFNg_GMCSF1 | -0.911 | 2.316 |
| Rv1432_day32 | 0.18 | 0.0 |
| Rv1565c_day32 | 0.073 | 0.0 |
| secA2_input | 2.511 | 0.283 |
| delta_Rv3594 | -0.771 | 0.353 |
| delta_Rv3717 | 0.559 | 1.446 |
| delta_Rv3811 | -0.605 | 1.947 |
| delta_Rv0954 | 1.048 | 0.886 |
| PonA1 | -3.011 | -0.95 |
| EccD1_KO | -2.782 | -1.441 |
| EspI_KO | -1.266 | -1.383 |
| PE35_KO | -4.404 | -2.354 |
| PPE68_KO | -3.484 | -3.424 |
| glycerol2 | -0.318 | -0.321 |
| lignocerate | -0.353 | -0.341 |
| oleate | -0.631 | -1.191 |
| phosphatidylcholine | -0.053 | -0.88 |
| acetate | -0.514 | -0.221 |
| glucAc | -0.726 | 0.451 |
| Rv0950ko | -0.392 | 1.668 |
| Rv1096ko | -0.513 | 2.714 |
| Rv3684ko | 0.445 | 2.021 |
| delta_otsA_trehalose | 2.647 | -0.861 |