Top 10 genes with highest correlation to Rv3320c/vapC44:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0701/rplC | (cc=0.6004) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.5433) | info on Rv3673c/- |
| Rv0183/- | (cc=0.48) | info on Rv0183/- |
| Rv2882c/frr | (cc=0.4674) | info on Rv2882c/frr |
| Rv3842c/glpQ1 | (cc=0.4637) | info on Rv3842c/glpQ1 |
| Rv0425c/ctpH | (cc=0.4631) | info on Rv0425c/ctpH |
| Rv1564c/treX | (cc=0.4508) | info on Rv1564c/treX |
| Rv0364/- | (cc=0.4445) | info on Rv0364/- |
| Rv0181c/- | (cc=0.432) | info on Rv0181c/- |
| Rv0021c/- | (cc=0.4289) | info on Rv0021c/- |
Correlation of Rv3320c/vapC44 with Rv0181c/-
Normalized LFCs for Rv3320c/vapC44:
(description and provenance of datasets)
| Rv3320c/vapC44 | Rv0181c/- | |
| Fe_supp_jason_reseq | -2.062 | -0.17 |
| low_pH_jason_reseq | 0.087 | 0.405 |
| NO_jason_reseq | 0.591 | 1.638 |
| B6_jason_reseq | -0.023 | 0.841 |
| MHCII_jason_reseq | -1.154 | -1.016 |
| Isoniazid02 | -0.106 | -1.072 |
| Rifampicin4 | 0.574 | 0.0 |
| Ethambutol3 | -0.107 | 0.473 |
| Meropenem3 | -0.017 | 1.101 |
| Vancomycin16 | 0.292 | 0.17 |
| Rv2680_day32 | 1.796 | 1.66 |
| H37Rv_KO_MarP | -0.397 | 0.731 |
| hypoxia_3wks | -0.219 | -0.658 |
| hypoxia_6wks | -0.132 | 0.543 |
| glycerol | 1.131 | -1.575 |
| cholesterol | 0.192 | 0.19 |
| AJ | 0.64 | -0.266 |
| Bibs02 | -0.372 | -0.193 |
| Bibs02c | -1.426 | 0.385 |
| BL6 | 3.306 | 2.071 |
| BL6a | 0.674 | 1.419 |
| BXD01 | 0.504 | 2.73 |
| BXD010 | -0.101 | 1.723 |
| BXD011 | 0.799 | 2.794 |
| BXD03 | 0.493 | 1.363 |
| BXD04 | 1.13 | 2.335 |
| BXD05 | 1.053 | 1.201 |
| BXD06 | 0.974 | 2.002 |
| BXD07 | 1.265 | 2.818 |
| BXD08 | 0.014 | 2.041 |
| BXD09 | 1.056 | 2.249 |
| CAST | 0.874 | 0.053 |
| CCcont | 0.937 | 0.824 |
| DS01 | -0.85 | -0.417 |
| DS02 | -0.331 | -0.268 |
| DS04 | -1.244 | 0.2 |
| DS0c | -0.146 | -0.324 |
| GP01 | 0.508 | 0.627 |
| GP02 | -0.603 | 1.496 |
| GP0c | -0.15 | 1.134 |
| NOD | 0.21 | -0.356 |
| NZO | -0.845 | 0.38 |
| PWK | -0.155 | 0.544 |
| H37Rv_KO_CtpC | -1.486 | 0.038 |
| H37Rv_KO_CtpD | -1.414 | 0.664 |
| H37Rv_KO_Rv1272 | -1.574 | 1.081 |
| H37Rv_KO_SugABC | 0.073 | 0.281 |
| H37Rv_KO_MbtN | -2.074 | 0.135 |
| Trans05 | 0.028 | 0.282 |
| macrophage_unactivated | -0.698 | -0.407 |
| IL1 | 0.433 | 1.05 |
| Rapamycin | 0.709 | 0.5 |
| Tcell | -0.215 | -0.375 |
| GMCSF | -0.584 | -0.795 |
| IFNab | -0.925 | -0.369 |
| IFNg | -0.267 | 0.176 |
| IFNg_GMCSF1 | -0.911 | -0.258 |
| Rv1432_day32 | 0.18 | 2.235 |
| Rv1565c_day32 | 0.073 | -0.643 |
| secA2_input | 2.511 | 0.297 |
| delta_Rv3594 | -0.771 | 1.094 |
| delta_Rv3717 | 0.559 | 1.06 |
| delta_Rv3811 | -0.605 | 1.124 |
| delta_Rv0954 | 1.048 | 0.61 |
| PonA1 | -3.011 | 0.314 |
| EccD1_KO | -2.782 | -0.122 |
| EspI_KO | -1.266 | -0.077 |
| PE35_KO | -4.404 | -0.3 |
| PPE68_KO | -3.484 | -0.118 |
| glycerol2 | -0.318 | 0.258 |
| lignocerate | -0.353 | -0.102 |
| oleate | -0.631 | 0.371 |
| phosphatidylcholine | -0.053 | -0.31 |
| acetate | -0.514 | 0.306 |
| glucAc | -0.726 | 0.425 |
| Rv0950ko | -0.392 | -0.305 |
| Rv1096ko | -0.513 | -0.305 |
| Rv3684ko | 0.445 | 0.157 |
| delta_otsA_trehalose | 2.647 | 2.031 |