Top 10 genes with highest correlation to Rv3320c/vapC44:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0701/rplC | (cc=0.6004) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.5433) | info on Rv3673c/- |
| Rv0183/- | (cc=0.48) | info on Rv0183/- |
| Rv2882c/frr | (cc=0.4674) | info on Rv2882c/frr |
| Rv3842c/glpQ1 | (cc=0.4637) | info on Rv3842c/glpQ1 |
| Rv0425c/ctpH | (cc=0.4631) | info on Rv0425c/ctpH |
| Rv1564c/treX | (cc=0.4508) | info on Rv1564c/treX |
| Rv0364/- | (cc=0.4445) | info on Rv0364/- |
| Rv0181c/- | (cc=0.432) | info on Rv0181c/- |
| Rv0021c/- | (cc=0.4289) | info on Rv0021c/- |
Correlation of Rv3320c/vapC44 with Rv0701/rplC
Normalized LFCs for Rv3320c/vapC44:
(description and provenance of datasets)
| Rv3320c/vapC44 | Rv0701/rplC | |
| Fe_supp_jason_reseq | -2.062 | 0.0 |
| low_pH_jason_reseq | 0.087 | 0.0 |
| NO_jason_reseq | 0.591 | 0.0 |
| B6_jason_reseq | -0.023 | 0.0 |
| MHCII_jason_reseq | -1.154 | 0.0 |
| Isoniazid02 | -0.106 | 0.0 |
| Rifampicin4 | 0.574 | 0.0 |
| Ethambutol3 | -0.107 | 0.0 |
| Meropenem3 | -0.017 | 0.0 |
| Vancomycin16 | 0.292 | 0.0 |
| Rv2680_day32 | 1.796 | 0.0 |
| H37Rv_KO_MarP | -0.397 | 0.0 |
| hypoxia_3wks | -0.219 | 0.0 |
| hypoxia_6wks | -0.132 | 0.0 |
| glycerol | 1.131 | 0.0 |
| cholesterol | 0.192 | 0.0 |
| AJ | 0.64 | 0.0 |
| Bibs02 | -0.372 | 0.0 |
| Bibs02c | -1.426 | 0.0 |
| BL6 | 3.306 | 0.0 |
| BL6a | 0.674 | 0.0 |
| BXD01 | 0.504 | 0.0 |
| BXD010 | -0.101 | 0.0 |
| BXD011 | 0.799 | 0.0 |
| BXD03 | 0.493 | 0.0 |
| BXD04 | 1.13 | 0.0 |
| BXD05 | 1.053 | 0.0 |
| BXD06 | 0.974 | 0.0 |
| BXD07 | 1.265 | 0.0 |
| BXD08 | 0.014 | 0.0 |
| BXD09 | 1.056 | 0.0 |
| CAST | 0.874 | 0.0 |
| CCcont | 0.937 | 0.0 |
| DS01 | -0.85 | 0.0 |
| DS02 | -0.331 | 0.0 |
| DS04 | -1.244 | 0.0 |
| DS0c | -0.146 | 0.0 |
| GP01 | 0.508 | 0.0 |
| GP02 | -0.603 | 0.0 |
| GP0c | -0.15 | 0.13 |
| NOD | 0.21 | 0.0 |
| NZO | -0.845 | 0.0 |
| PWK | -0.155 | 0.0 |
| H37Rv_KO_CtpC | -1.486 | 0.0 |
| H37Rv_KO_CtpD | -1.414 | 0.0 |
| H37Rv_KO_Rv1272 | -1.574 | 0.0 |
| H37Rv_KO_SugABC | 0.073 | 0.0 |
| H37Rv_KO_MbtN | -2.074 | 0.0 |
| Trans05 | 0.028 | 0.0 |
| macrophage_unactivated | -0.698 | 0.0 |
| IL1 | 0.433 | 0.0 |
| Rapamycin | 0.709 | 0.0 |
| Tcell | -0.215 | 0.0 |
| GMCSF | -0.584 | 0.0 |
| IFNab | -0.925 | 0.0 |
| IFNg | -0.267 | 0.0 |
| IFNg_GMCSF1 | -0.911 | 0.0 |
| Rv1432_day32 | 0.18 | 0.0 |
| Rv1565c_day32 | 0.073 | 0.0 |
| secA2_input | 2.511 | 1.675 |
| delta_Rv3594 | -0.771 | 0.0 |
| delta_Rv3717 | 0.559 | 0.0 |
| delta_Rv3811 | -0.605 | 0.0 |
| delta_Rv0954 | 1.048 | 0.0 |
| PonA1 | -3.011 | 0.0 |
| EccD1_KO | -2.782 | -1.47 |
| EspI_KO | -1.266 | -1.668 |
| PE35_KO | -4.404 | -1.706 |
| PPE68_KO | -3.484 | -1.872 |
| glycerol2 | -0.318 | 0.0 |
| lignocerate | -0.353 | 0.0 |
| oleate | -0.631 | 0.0 |
| phosphatidylcholine | -0.053 | 0.0 |
| acetate | -0.514 | 0.0 |
| glucAc | -0.726 | 0.0 |
| Rv0950ko | -0.392 | 0.0 |
| Rv1096ko | -0.513 | 0.0 |
| Rv3684ko | 0.445 | 0.0 |
| delta_otsA_trehalose | 2.647 | 0.254 |