Top 10 genes with highest correlation to Rv3283/sseA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0561c/- | (cc=0.7895) | info on Rv0561c/- |
| Rv0180c/- | (cc=0.7268) | info on Rv0180c/- |
| Rv2563/- | (cc=0.7083) | info on Rv2563/- |
| Rv1592c/- | (cc=0.7058) | info on Rv1592c/- |
| Rv3651/- | (cc=0.6723) | info on Rv3651/- |
| Rv0361/- | (cc=0.6667) | info on Rv0361/- |
| Rv0406c/- | (cc=0.6607) | info on Rv0406c/- |
| Rv2564/glnQ | (cc=0.6442) | info on Rv2564/glnQ |
| Rv2383c/mbtB | (cc=0.6117) | info on Rv2383c/mbtB |
| Rv2380c/mbtE | (cc=0.6063) | info on Rv2380c/mbtE |
Correlation of Rv3283/sseA with Rv0406c/-
Normalized LFCs for Rv3283/sseA:
(description and provenance of datasets)
| Rv3283/sseA | Rv0406c/- | |
| Fe_supp_jason_reseq | 3.375 | 1.271 |
| low_pH_jason_reseq | -0.979 | -0.669 |
| NO_jason_reseq | -1.173 | -2.746 |
| B6_jason_reseq | -0.649 | -0.444 |
| MHCII_jason_reseq | 0.406 | 0.577 |
| Isoniazid02 | -1.008 | 0.662 |
| Rifampicin4 | -2.258 | -1.034 |
| Ethambutol3 | -1.254 | 0.355 |
| Meropenem3 | -2.709 | 0.512 |
| Vancomycin16 | -2.735 | 0.801 |
| Rv2680_day32 | -2.317 | -1.486 |
| H37Rv_KO_MarP | -1.319 | -1.834 |
| hypoxia_3wks | -2.181 | -1.376 |
| hypoxia_6wks | -1.934 | -1.56 |
| glycerol | 3.882 | 0.762 |
| cholesterol | 6.0 | 0.333 |
| AJ | -1.793 | -1.55 |
| Bibs02 | -0.796 | -0.538 |
| Bibs02c | 0.235 | 0.203 |
| BL6 | -1.937 | -2.306 |
| BL6a | -0.725 | -0.913 |
| BXD01 | -1.887 | -1.496 |
| BXD010 | -1.856 | -2.642 |
| BXD011 | -1.346 | -1.921 |
| BXD03 | -2.094 | -2.456 |
| BXD04 | -1.915 | -2.246 |
| BXD05 | -1.95 | -3.033 |
| BXD06 | -2.067 | -2.285 |
| BXD07 | -2.006 | -2.857 |
| BXD08 | -1.927 | -1.232 |
| BXD09 | -2.176 | -2.371 |
| CAST | 0.537 | -2.002 |
| CCcont | 0.199 | -0.757 |
| DS01 | 2.616 | 1.316 |
| DS02 | 0.852 | 1.18 |
| DS04 | 1.186 | 1.31 |
| DS0c | 2.855 | 1.139 |
| GP01 | -1.529 | -2.109 |
| GP02 | -1.289 | -1.808 |
| GP0c | -2.014 | -1.088 |
| NOD | 0.952 | -1.246 |
| NZO | -1.542 | -2.349 |
| PWK | -0.59 | -1.384 |
| H37Rv_KO_CtpC | 0.554 | -0.785 |
| H37Rv_KO_CtpD | -0.229 | -1.885 |
| H37Rv_KO_Rv1272 | -0.956 | -1.52 |
| H37Rv_KO_SugABC | -0.926 | -2.115 |
| H37Rv_KO_MbtN | -0.797 | -2.24 |
| Trans05 | -1.893 | -1.893 |
| macrophage_unactivated | 0.0 | 0.496 |
| IL1 | -0.955 | -1.026 |
| Rapamycin | -1.372 | -1.062 |
| Tcell | -1.049 | 0.648 |
| GMCSF | -1.18 | 0.182 |
| IFNab | -1.351 | -0.296 |
| IFNg | -1.195 | -0.543 |
| IFNg_GMCSF1 | -1.405 | -0.638 |
| Rv1432_day32 | -0.999 | -1.724 |
| Rv1565c_day32 | 1.848 | 1.02 |
| secA2_input | 0.881 | 0.498 |
| delta_Rv3594 | -0.569 | -0.854 |
| delta_Rv3717 | -1.432 | -1.193 |
| delta_Rv3811 | -1.487 | -2.061 |
| delta_Rv0954 | 3.34 | 1.234 |
| PonA1 | 4.717 | 0.613 |
| EccD1_KO | 1.085 | 1.779 |
| EspI_KO | 0.665 | 0.299 |
| PE35_KO | 4.078 | 1.639 |
| PPE68_KO | 3.072 | 1.645 |
| glycerol2 | -1.401 | -2.404 |
| lignocerate | -1.494 | -1.577 |
| oleate | -2.752 | -3.281 |
| phosphatidylcholine | -1.162 | -1.172 |
| acetate | -0.377 | 0.101 |
| glucAc | -1.463 | -0.419 |
| Rv0950ko | -0.585 | 0.748 |
| Rv1096ko | -0.148 | 0.591 |
| Rv3684ko | 0.039 | -0.675 |
| delta_otsA_trehalose | -0.281 | 0.133 |