Top 10 genes with highest correlation to Rv3283/sseA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0561c/- | (cc=0.7895) | info on Rv0561c/- |
| Rv0180c/- | (cc=0.7268) | info on Rv0180c/- |
| Rv2563/- | (cc=0.7083) | info on Rv2563/- |
| Rv1592c/- | (cc=0.7058) | info on Rv1592c/- |
| Rv3651/- | (cc=0.6723) | info on Rv3651/- |
| Rv0361/- | (cc=0.6667) | info on Rv0361/- |
| Rv0406c/- | (cc=0.6607) | info on Rv0406c/- |
| Rv2564/glnQ | (cc=0.6442) | info on Rv2564/glnQ |
| Rv2383c/mbtB | (cc=0.6117) | info on Rv2383c/mbtB |
| Rv2380c/mbtE | (cc=0.6063) | info on Rv2380c/mbtE |
Correlation of Rv3283/sseA with Rv0180c/-
Normalized LFCs for Rv3283/sseA:
(description and provenance of datasets)
| Rv3283/sseA | Rv0180c/- | |
| Fe_supp_jason_reseq | 3.375 | 1.796 |
| low_pH_jason_reseq | -0.979 | 0.0 |
| NO_jason_reseq | -1.173 | 0.0 |
| B6_jason_reseq | -0.649 | 0.0 |
| MHCII_jason_reseq | 0.406 | 0.0 |
| Isoniazid02 | -1.008 | -1.101 |
| Rifampicin4 | -2.258 | -2.762 |
| Ethambutol3 | -1.254 | -0.761 |
| Meropenem3 | -2.709 | -2.105 |
| Vancomycin16 | -2.735 | -1.499 |
| Rv2680_day32 | -2.317 | 0.0 |
| H37Rv_KO_MarP | -1.319 | -3.151 |
| hypoxia_3wks | -2.181 | 0.0 |
| hypoxia_6wks | -1.934 | 0.0 |
| glycerol | 3.882 | 4.308 |
| cholesterol | 6.0 | 3.09 |
| AJ | -1.793 | 0.0 |
| Bibs02 | -0.796 | 0.0 |
| Bibs02c | 0.235 | 0.735 |
| BL6 | -1.937 | 0.0 |
| BL6a | -0.725 | 0.0 |
| BXD01 | -1.887 | 0.0 |
| BXD010 | -1.856 | 0.0 |
| BXD011 | -1.346 | 0.0 |
| BXD03 | -2.094 | 0.0 |
| BXD04 | -1.915 | 0.0 |
| BXD05 | -1.95 | 0.0 |
| BXD06 | -2.067 | 0.0 |
| BXD07 | -2.006 | 0.0 |
| BXD08 | -1.927 | 0.0 |
| BXD09 | -2.176 | 0.0 |
| CAST | 0.537 | 0.439 |
| CCcont | 0.199 | 0.0 |
| DS01 | 2.616 | 3.713 |
| DS02 | 0.852 | 0.597 |
| DS04 | 1.186 | 0.533 |
| DS0c | 2.855 | 1.788 |
| GP01 | -1.529 | 0.0 |
| GP02 | -1.289 | 0.0 |
| GP0c | -2.014 | 0.0 |
| NOD | 0.952 | 0.952 |
| NZO | -1.542 | 0.0 |
| PWK | -0.59 | 0.0 |
| H37Rv_KO_CtpC | 0.554 | 0.162 |
| H37Rv_KO_CtpD | -0.229 | 0.0 |
| H37Rv_KO_Rv1272 | -0.956 | 0.0 |
| H37Rv_KO_SugABC | -0.926 | 0.0 |
| H37Rv_KO_MbtN | -0.797 | 0.283 |
| Trans05 | -1.893 | 0.0 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | -0.955 | 0.0 |
| Rapamycin | -1.372 | 0.0 |
| Tcell | -1.049 | 0.0 |
| GMCSF | -1.18 | 0.0 |
| IFNab | -1.351 | 0.0 |
| IFNg | -1.195 | 0.0 |
| IFNg_GMCSF1 | -1.405 | 0.0 |
| Rv1432_day32 | -0.999 | 0.0 |
| Rv1565c_day32 | 1.848 | 0.0 |
| secA2_input | 0.881 | -0.221 |
| delta_Rv3594 | -0.569 | -0.211 |
| delta_Rv3717 | -1.432 | -0.174 |
| delta_Rv3811 | -1.487 | -0.205 |
| delta_Rv0954 | 3.34 | 0.163 |
| PonA1 | 4.717 | 2.587 |
| EccD1_KO | 1.085 | 0.0 |
| EspI_KO | 0.665 | 0.0 |
| PE35_KO | 4.078 | 5.507 |
| PPE68_KO | 3.072 | 3.846 |
| glycerol2 | -1.401 | 0.0 |
| lignocerate | -1.494 | 0.0 |
| oleate | -2.752 | 0.0 |
| phosphatidylcholine | -1.162 | 0.0 |
| acetate | -0.377 | 0.0 |
| glucAc | -1.463 | 0.0 |
| Rv0950ko | -0.585 | -2.831 |
| Rv1096ko | -0.148 | 0.856 |
| Rv3684ko | 0.039 | 1.254 |
| delta_otsA_trehalose | -0.281 | -0.34 |