Top 10 genes with highest correlation to Rv3283/sseA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0561c/- | (cc=0.7895) | info on Rv0561c/- |
| Rv0180c/- | (cc=0.7268) | info on Rv0180c/- |
| Rv2563/- | (cc=0.7083) | info on Rv2563/- |
| Rv1592c/- | (cc=0.7058) | info on Rv1592c/- |
| Rv3651/- | (cc=0.6723) | info on Rv3651/- |
| Rv0361/- | (cc=0.6667) | info on Rv0361/- |
| Rv0406c/- | (cc=0.6607) | info on Rv0406c/- |
| Rv2564/glnQ | (cc=0.6442) | info on Rv2564/glnQ |
| Rv2383c/mbtB | (cc=0.6117) | info on Rv2383c/mbtB |
| Rv2380c/mbtE | (cc=0.6063) | info on Rv2380c/mbtE |
Correlation of Rv3283/sseA with Rv0561c/-
Normalized LFCs for Rv3283/sseA:
(description and provenance of datasets)
| Rv3283/sseA | Rv0561c/- | |
| Fe_supp_jason_reseq | 3.375 | 2.559 |
| low_pH_jason_reseq | -0.979 | 0.0 |
| NO_jason_reseq | -1.173 | -0.995 |
| B6_jason_reseq | -0.649 | -0.421 |
| MHCII_jason_reseq | 0.406 | 0.742 |
| Isoniazid02 | -1.008 | -0.045 |
| Rifampicin4 | -2.258 | -1.887 |
| Ethambutol3 | -1.254 | -0.517 |
| Meropenem3 | -2.709 | -0.895 |
| Vancomycin16 | -2.735 | -1.021 |
| Rv2680_day32 | -2.317 | -0.554 |
| H37Rv_KO_MarP | -1.319 | -0.838 |
| hypoxia_3wks | -2.181 | -1.543 |
| hypoxia_6wks | -1.934 | -1.599 |
| glycerol | 3.882 | 2.098 |
| cholesterol | 6.0 | 1.736 |
| AJ | -1.793 | -1.531 |
| Bibs02 | -0.796 | -0.563 |
| Bibs02c | 0.235 | -0.353 |
| BL6 | -1.937 | -2.023 |
| BL6a | -0.725 | -1.148 |
| BXD01 | -1.887 | -2.107 |
| BXD010 | -1.856 | -2.072 |
| BXD011 | -1.346 | -1.711 |
| BXD03 | -2.094 | -2.187 |
| BXD04 | -1.915 | -1.877 |
| BXD05 | -1.95 | -2.042 |
| BXD06 | -2.067 | -2.159 |
| BXD07 | -2.006 | -2.101 |
| BXD08 | -1.927 | -2.151 |
| BXD09 | -2.176 | -2.273 |
| CAST | 0.537 | -2.181 |
| CCcont | 0.199 | -0.552 |
| DS01 | 2.616 | 1.685 |
| DS02 | 0.852 | -0.544 |
| DS04 | 1.186 | -0.911 |
| DS0c | 2.855 | 1.37 |
| GP01 | -1.529 | -1.409 |
| GP02 | -1.289 | -1.263 |
| GP0c | -2.014 | -2.103 |
| NOD | 0.952 | -0.903 |
| NZO | -1.542 | -2.381 |
| PWK | -0.59 | -1.137 |
| H37Rv_KO_CtpC | 0.554 | -0.941 |
| H37Rv_KO_CtpD | -0.229 | -1.603 |
| H37Rv_KO_Rv1272 | -0.956 | -0.872 |
| H37Rv_KO_SugABC | -0.926 | -1.414 |
| H37Rv_KO_MbtN | -0.797 | -1.471 |
| Trans05 | -1.893 | -1.983 |
| macrophage_unactivated | 0.0 | -0.316 |
| IL1 | -0.955 | -1.735 |
| Rapamycin | -1.372 | -1.795 |
| Tcell | -1.049 | -0.671 |
| GMCSF | -1.18 | -1.18 |
| IFNab | -1.351 | -0.623 |
| IFNg | -1.195 | -1.195 |
| IFNg_GMCSF1 | -1.405 | -0.314 |
| Rv1432_day32 | -0.999 | -0.632 |
| Rv1565c_day32 | 1.848 | 0.0 |
| secA2_input | 0.881 | 0.676 |
| delta_Rv3594 | -0.569 | -0.684 |
| delta_Rv3717 | -1.432 | -0.736 |
| delta_Rv3811 | -1.487 | -0.665 |
| delta_Rv0954 | 3.34 | 2.95 |
| PonA1 | 4.717 | 2.163 |
| EccD1_KO | 1.085 | -0.26 |
| EspI_KO | 0.665 | 0.739 |
| PE35_KO | 4.078 | 0.496 |
| PPE68_KO | 3.072 | 0.394 |
| glycerol2 | -1.401 | -1.366 |
| lignocerate | -1.494 | -0.759 |
| oleate | -2.752 | -3.187 |
| phosphatidylcholine | -1.162 | -0.036 |
| acetate | -0.377 | 1.25 |
| glucAc | -1.463 | 0.853 |
| Rv0950ko | -0.585 | -0.989 |
| Rv1096ko | -0.148 | -0.549 |
| Rv3684ko | 0.039 | -0.596 |
| delta_otsA_trehalose | -0.281 | -0.234 |