Top 10 genes with highest correlation to Rv3282/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0264c/- | (cc=0.5307) | info on Rv0264c/- |
| Rv3641c/fic | (cc=0.478) | info on Rv3641c/fic |
| Rv3697c/vapC48 | (cc=0.4757) | info on Rv3697c/vapC48 |
| Rv2647/- | (cc=0.4695) | info on Rv2647/- |
| Rv3018c/PPE46 | (cc=0.4684) | info on Rv3018c/PPE46 |
| Rv3512/PE_PGRS56 | (cc=0.4601) | info on Rv3512/PE_PGRS56 |
| Rv3681c/whiB4 | (cc=0.46) | info on Rv3681c/whiB4 |
| Rv2808/- | (cc=0.4514) | info on Rv2808/- |
| Rv3353c/- | (cc=0.4422) | info on Rv3353c/- |
| Rv0278c/PE_PGRS3 | (cc=0.4339) | info on Rv0278c/PE_PGRS3 |
Correlation of Rv3282/- with Rv3353c/-
Normalized LFCs for Rv3282/-:
(description and provenance of datasets)
| Rv3282/- | Rv3353c/- | |
| Fe_supp_jason_reseq | 0.633 | -0.717 |
| low_pH_jason_reseq | -0.793 | -0.11 |
| NO_jason_reseq | -0.155 | -0.278 |
| B6_jason_reseq | 1.044 | 0.221 |
| MHCII_jason_reseq | 1.491 | 1.201 |
| Isoniazid02 | -0.383 | -0.202 |
| Rifampicin4 | 0.108 | -0.376 |
| Ethambutol3 | -0.207 | -0.405 |
| Meropenem3 | -0.315 | -0.026 |
| Vancomycin16 | 0.207 | 0.172 |
| Rv2680_day32 | 0.131 | -1.07 |
| H37Rv_KO_MarP | -0.199 | 0.638 |
| hypoxia_3wks | -0.439 | -0.478 |
| hypoxia_6wks | -1.044 | -1.063 |
| glycerol | 0.69 | 0.846 |
| cholesterol | 1.121 | 0.675 |
| AJ | 1.758 | 0.62 |
| Bibs02 | -0.935 | 0.603 |
| Bibs02c | 1.332 | -0.582 |
| BL6 | 0.266 | -0.568 |
| BL6a | 0.191 | -0.494 |
| BXD01 | 0.853 | -1.238 |
| BXD010 | 0.374 | -2.853 |
| BXD011 | -0.34 | -0.857 |
| BXD03 | 0.088 | -0.144 |
| BXD04 | 0.157 | -1.562 |
| BXD05 | 0.585 | -1.466 |
| BXD06 | 0.0 | -1.137 |
| BXD07 | 0.09 | -1.715 |
| BXD08 | 0.246 | -1.122 |
| BXD09 | 0.135 | -1.577 |
| CAST | 0.292 | 0.127 |
| CCcont | 0.923 | -0.098 |
| DS01 | 1.181 | -0.137 |
| DS02 | -0.314 | -0.471 |
| DS04 | 1.088 | 0.793 |
| DS0c | -0.231 | -0.572 |
| GP01 | -0.62 | -0.708 |
| GP02 | -0.825 | 0.932 |
| GP0c | -0.044 | -2.083 |
| NOD | 1.168 | 0.848 |
| NZO | -0.367 | 0.533 |
| PWK | 1.319 | 0.443 |
| H37Rv_KO_CtpC | 0.706 | 0.684 |
| H37Rv_KO_CtpD | -0.284 | 0.211 |
| H37Rv_KO_Rv1272 | -0.646 | -0.093 |
| H37Rv_KO_SugABC | -0.622 | -2.271 |
| H37Rv_KO_MbtN | -0.782 | -1.938 |
| Trans05 | 0.758 | -0.616 |
| macrophage_unactivated | 0.552 | -1.218 |
| IL1 | -1.468 | -3.1 |
| Rapamycin | -1.519 | -1.553 |
| Tcell | -1.01 | -1.548 |
| GMCSF | -0.671 | -1.45 |
| IFNab | 0.139 | -3.205 |
| IFNg | -1.502 | -4.196 |
| IFNg_GMCSF1 | 0.283 | -0.591 |
| Rv1432_day32 | -0.827 | 0.0 |
| Rv1565c_day32 | -0.218 | -0.504 |
| secA2_input | 0.515 | -0.712 |
| delta_Rv3594 | 0.0 | -0.595 |
| delta_Rv3717 | -1.212 | 0.132 |
| delta_Rv3811 | 0.532 | 0.8 |
| delta_Rv0954 | -0.83 | 1.271 |
| PonA1 | -0.741 | 1.024 |
| EccD1_KO | -0.687 | 0.358 |
| EspI_KO | -1.184 | -0.471 |
| PE35_KO | -1.321 | -0.866 |
| PPE68_KO | -0.467 | -0.682 |
| glycerol2 | 1.473 | 2.969 |
| lignocerate | 1.593 | 3.989 |
| oleate | 0.763 | -1.691 |
| phosphatidylcholine | 1.494 | 2.968 |
| acetate | 1.327 | 3.361 |
| glucAc | 1.186 | 2.601 |
| Rv0950ko | 0.371 | -0.826 |
| Rv1096ko | 0.19 | 0.905 |
| Rv3684ko | -0.675 | 2.112 |
| delta_otsA_trehalose | -1.241 | -0.27 |