Top 10 genes with highest correlation to Rv3282/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0264c/- | (cc=0.5307) | info on Rv0264c/- |
| Rv3641c/fic | (cc=0.478) | info on Rv3641c/fic |
| Rv3697c/vapC48 | (cc=0.4757) | info on Rv3697c/vapC48 |
| Rv2647/- | (cc=0.4695) | info on Rv2647/- |
| Rv3018c/PPE46 | (cc=0.4684) | info on Rv3018c/PPE46 |
| Rv3512/PE_PGRS56 | (cc=0.4601) | info on Rv3512/PE_PGRS56 |
| Rv3681c/whiB4 | (cc=0.46) | info on Rv3681c/whiB4 |
| Rv2808/- | (cc=0.4514) | info on Rv2808/- |
| Rv3353c/- | (cc=0.4422) | info on Rv3353c/- |
| Rv0278c/PE_PGRS3 | (cc=0.4339) | info on Rv0278c/PE_PGRS3 |
Correlation of Rv3282/- with Rv2808/-
Normalized LFCs for Rv3282/-:
(description and provenance of datasets)
| Rv3282/- | Rv2808/- | |
| Fe_supp_jason_reseq | 0.633 | 0.766 |
| low_pH_jason_reseq | -0.793 | -0.124 |
| NO_jason_reseq | -0.155 | 0.69 |
| B6_jason_reseq | 1.044 | 2.801 |
| MHCII_jason_reseq | 1.491 | 1.22 |
| Isoniazid02 | -0.383 | 0.0 |
| Rifampicin4 | 0.108 | 0.791 |
| Ethambutol3 | -0.207 | 0.427 |
| Meropenem3 | -0.315 | 0.444 |
| Vancomycin16 | 0.207 | 0.775 |
| Rv2680_day32 | 0.131 | -3.002 |
| H37Rv_KO_MarP | -0.199 | -0.114 |
| hypoxia_3wks | -0.439 | -0.825 |
| hypoxia_6wks | -1.044 | 0.023 |
| glycerol | 0.69 | -0.066 |
| cholesterol | 1.121 | 0.379 |
| AJ | 1.758 | 1.128 |
| Bibs02 | -0.935 | 0.642 |
| Bibs02c | 1.332 | -0.103 |
| BL6 | 0.266 | -0.255 |
| BL6a | 0.191 | -0.502 |
| BXD01 | 0.853 | 0.222 |
| BXD010 | 0.374 | 0.472 |
| BXD011 | -0.34 | 0.719 |
| BXD03 | 0.088 | 0.266 |
| BXD04 | 0.157 | -0.061 |
| BXD05 | 0.585 | -0.851 |
| BXD06 | 0.0 | 0.246 |
| BXD07 | 0.09 | 0.138 |
| BXD08 | 0.246 | 0.66 |
| BXD09 | 0.135 | -0.314 |
| CAST | 0.292 | 1.565 |
| CCcont | 0.923 | 0.244 |
| DS01 | 1.181 | 0.589 |
| DS02 | -0.314 | 1.175 |
| DS04 | 1.088 | 0.822 |
| DS0c | -0.231 | 0.848 |
| GP01 | -0.62 | -0.654 |
| GP02 | -0.825 | -0.764 |
| GP0c | -0.044 | -0.577 |
| NOD | 1.168 | 2.481 |
| NZO | -0.367 | 1.097 |
| PWK | 1.319 | 0.334 |
| H37Rv_KO_CtpC | 0.706 | 0.976 |
| H37Rv_KO_CtpD | -0.284 | -1.163 |
| H37Rv_KO_Rv1272 | -0.646 | 0.045 |
| H37Rv_KO_SugABC | -0.622 | -0.929 |
| H37Rv_KO_MbtN | -0.782 | 0.264 |
| Trans05 | 0.758 | -1.679 |
| macrophage_unactivated | 0.552 | -0.259 |
| IL1 | -1.468 | -3.168 |
| Rapamycin | -1.519 | -0.948 |
| Tcell | -1.01 | -0.404 |
| GMCSF | -0.671 | -1.853 |
| IFNab | 0.139 | -1.808 |
| IFNg | -1.502 | -2.638 |
| IFNg_GMCSF1 | 0.283 | -1.345 |
| Rv1432_day32 | -0.827 | -1.675 |
| Rv1565c_day32 | -0.218 | -1.139 |
| secA2_input | 0.515 | -0.504 |
| delta_Rv3594 | 0.0 | -0.066 |
| delta_Rv3717 | -1.212 | -1.057 |
| delta_Rv3811 | 0.532 | -1.034 |
| delta_Rv0954 | -0.83 | -1.495 |
| PonA1 | -0.741 | -2.308 |
| EccD1_KO | -0.687 | -0.927 |
| EspI_KO | -1.184 | -0.091 |
| PE35_KO | -1.321 | 0.359 |
| PPE68_KO | -0.467 | -0.544 |
| glycerol2 | 1.473 | -0.433 |
| lignocerate | 1.593 | 0.145 |
| oleate | 0.763 | -0.265 |
| phosphatidylcholine | 1.494 | 0.277 |
| acetate | 1.327 | -0.382 |
| glucAc | 1.186 | 0.088 |
| Rv0950ko | 0.371 | 0.084 |
| Rv1096ko | 0.19 | -0.262 |
| Rv3684ko | -0.675 | -0.481 |
| delta_otsA_trehalose | -1.241 | -2.072 |