Top 10 genes with highest correlation to Rv3268/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0380c/- | (cc=0.5052) | info on Rv0380c/- |
| Rv2321c/rocD2 | (cc=0.4822) | info on Rv2321c/rocD2 |
| Rv3537/kstD | (cc=0.4808) | info on Rv3537/kstD |
| Rv3692/moxR2 | (cc=0.4797) | info on Rv3692/moxR2 |
| Rv0576/- | (cc=0.4553) | info on Rv0576/- |
| Rv3840/- | (cc=0.4472) | info on Rv3840/- |
| Rv3036c/TB22.2 | (cc=0.4444) | info on Rv3036c/TB22.2 |
| Rv1830/- | (cc=0.4412) | info on Rv1830/- |
| Rv0209/- | (cc=0.4411) | info on Rv0209/- |
| Rv1128c/- | (cc=0.4198) | info on Rv1128c/- |
Correlation of Rv3268/- with Rv3537/kstD
Normalized LFCs for Rv3268/-:
(description and provenance of datasets)
| Rv3268/- | Rv3537/kstD | |
| Fe_supp_jason_reseq | 0.069 | -1.077 |
| low_pH_jason_reseq | -0.582 | 0.821 |
| NO_jason_reseq | -1.013 | -0.344 |
| B6_jason_reseq | -1.626 | -2.065 |
| MHCII_jason_reseq | -1.818 | -1.746 |
| Isoniazid02 | -1.058 | -0.044 |
| Rifampicin4 | 0.712 | -0.341 |
| Ethambutol3 | 0.045 | -0.276 |
| Meropenem3 | -0.502 | -0.073 |
| Vancomycin16 | 0.016 | 0.52 |
| Rv2680_day32 | -0.956 | -1.619 |
| H37Rv_KO_MarP | 0.586 | 0.741 |
| hypoxia_3wks | 0.55 | 0.108 |
| hypoxia_6wks | 1.274 | 0.223 |
| glycerol | -0.543 | -0.215 |
| cholesterol | -0.704 | -1.569 |
| AJ | 0.055 | -1.318 |
| Bibs02 | 0.278 | -0.935 |
| Bibs02c | -0.918 | -1.314 |
| BL6 | 0.0 | 0.625 |
| BL6a | -0.242 | -0.445 |
| BXD01 | 0.219 | 0.347 |
| BXD010 | 0.274 | 0.307 |
| BXD011 | 0.076 | 0.436 |
| BXD03 | 0.459 | 0.861 |
| BXD04 | 0.568 | -0.566 |
| BXD05 | 0.288 | 0.249 |
| BXD06 | 0.785 | -0.246 |
| BXD07 | -0.132 | 0.176 |
| BXD08 | 0.16 | -0.092 |
| BXD09 | 0.395 | 0.047 |
| CAST | -0.329 | -0.616 |
| CCcont | -0.037 | 0.398 |
| DS01 | 0.084 | -1.632 |
| DS02 | -0.296 | -0.679 |
| DS04 | -0.134 | -0.519 |
| DS0c | -0.135 | -1.645 |
| GP01 | 1.864 | 0.81 |
| GP02 | 1.292 | -0.426 |
| GP0c | 0.297 | 1.507 |
| NOD | -0.083 | -1.149 |
| NZO | -0.429 | -0.812 |
| PWK | -0.061 | -0.703 |
| H37Rv_KO_CtpC | -0.122 | -0.113 |
| H37Rv_KO_CtpD | -0.933 | -0.088 |
| H37Rv_KO_Rv1272 | 0.076 | -0.098 |
| H37Rv_KO_SugABC | -0.372 | 1.302 |
| H37Rv_KO_MbtN | 0.21 | 0.536 |
| Trans05 | 0.402 | 0.313 |
| macrophage_unactivated | 0.098 | 0.549 |
| IL1 | 0.288 | 0.0 |
| Rapamycin | 0.939 | -0.114 |
| Tcell | 0.365 | -0.375 |
| GMCSF | 0.726 | 0.628 |
| IFNab | 0.889 | 0.813 |
| IFNg | 0.337 | 0.879 |
| IFNg_GMCSF1 | 0.657 | 0.943 |
| Rv1432_day32 | -0.271 | -0.232 |
| Rv1565c_day32 | 0.289 | -1.529 |
| secA2_input | 0.429 | -0.474 |
| delta_Rv3594 | 0.304 | -0.167 |
| delta_Rv3717 | 0.481 | -0.325 |
| delta_Rv3811 | 0.894 | 0.257 |
| delta_Rv0954 | 0.243 | 0.423 |
| PonA1 | 0.451 | -0.159 |
| EccD1_KO | 0.168 | -1.184 |
| EspI_KO | -1.155 | -1.435 |
| PE35_KO | 0.128 | -0.817 |
| PPE68_KO | -0.739 | -0.138 |
| glycerol2 | 0.276 | -0.161 |
| lignocerate | -0.018 | -0.52 |
| oleate | 0.359 | 0.269 |
| phosphatidylcholine | 0.147 | -0.161 |
| acetate | -0.243 | -0.512 |
| glucAc | -0.327 | -0.959 |
| Rv0950ko | 0.163 | -0.374 |
| Rv1096ko | 0.368 | -0.244 |
| Rv3684ko | 0.537 | 0.19 |
| delta_otsA_trehalose | -1.794 | -0.858 |