Top 10 genes with highest correlation to Rv3267/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1411c/lprG | (cc=0.7844) | info on Rv1411c/lprG |
| Rv1410c/- | (cc=0.729) | info on Rv1410c/- |
| Rv1111c/- | (cc=0.6193) | info on Rv1111c/- |
| Rv0050/ponA1 | (cc=0.5751) | info on Rv0050/ponA1 |
| Rv3670/ephE | (cc=0.5299) | info on Rv3670/ephE |
| Rv2224c/caeA | (cc=0.5253) | info on Rv2224c/caeA |
| Rv0637/hadC | (cc=0.5233) | info on Rv0637/hadC |
| Rv3794/embA | (cc=0.5198) | info on Rv3794/embA |
| Rv0017c/rodA | (cc=0.5147) | info on Rv0017c/rodA |
| Rv1747/- | (cc=0.5124) | info on Rv1747/- |
Correlation of Rv3267/- with Rv3794/embA
Normalized LFCs for Rv3267/-:
(description and provenance of datasets)
| Rv3267/- | Rv3794/embA | |
| Fe_supp_jason_reseq | 3.866 | -0.169 |
| low_pH_jason_reseq | 0.0 | -0.371 |
| NO_jason_reseq | 0.788 | 0.263 |
| B6_jason_reseq | 0.119 | -0.119 |
| MHCII_jason_reseq | 0.458 | -0.474 |
| Isoniazid02 | 0.744 | 0.469 |
| Rifampicin4 | -5.041 | -1.465 |
| Ethambutol3 | -1.401 | -0.824 |
| Meropenem3 | -1.942 | -0.648 |
| Vancomycin16 | -5.306 | -1.799 |
| Rv2680_day32 | -0.642 | -0.131 |
| H37Rv_KO_MarP | -2.122 | -0.886 |
| hypoxia_3wks | 0.279 | 1.483 |
| hypoxia_6wks | -0.58 | 0.171 |
| glycerol | -0.992 | -0.202 |
| cholesterol | 0.482 | 0.132 |
| AJ | -0.698 | -0.232 |
| Bibs02 | -0.55 | -0.183 |
| Bibs02c | -1.028 | -0.209 |
| BL6 | 2.677 | -0.125 |
| BL6a | -0.277 | 0.499 |
| BXD01 | 0.0 | 0.0 |
| BXD010 | 0.543 | 0.502 |
| BXD011 | 0.08 | 0.222 |
| BXD03 | 0.243 | 1.464 |
| BXD04 | 0.855 | 0.485 |
| BXD05 | 0.836 | 0.436 |
| BXD06 | -0.187 | 0.432 |
| BXD07 | 0.393 | 0.543 |
| BXD08 | 0.31 | 0.121 |
| BXD09 | 0.089 | 0.245 |
| CAST | -0.501 | 0.0 |
| CCcont | 2.965 | 0.0 |
| DS01 | -0.926 | -0.236 |
| DS02 | -0.852 | -0.217 |
| DS04 | 0.239 | -0.194 |
| DS0c | -0.652 | -0.217 |
| GP01 | -0.387 | 0.09 |
| GP02 | -0.326 | -0.083 |
| GP0c | 1.465 | 1.408 |
| NOD | -1.103 | -0.225 |
| NZO | -0.98 | -0.199 |
| PWK | -0.963 | -0.196 |
| H37Rv_KO_CtpC | -0.109 | 0.41 |
| H37Rv_KO_CtpD | 0.787 | 1.033 |
| H37Rv_KO_Rv1272 | 0.658 | -0.141 |
| H37Rv_KO_SugABC | -0.138 | -0.099 |
| H37Rv_KO_MbtN | 0.391 | 0.0 |
| Trans05 | 0.554 | 0.0 |
| macrophage_unactivated | 0.0 | 0.246 |
| IL1 | -1.231 | 1.231 |
| Rapamycin | 0.181 | 0.239 |
| Tcell | -1.906 | 0.0 |
| GMCSF | 0.0 | -0.217 |
| IFNab | 2.543 | 1.605 |
| IFNg | -1.109 | 0.208 |
| IFNg_GMCSF1 | -1.059 | 0.245 |
| Rv1432_day32 | -0.198 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.533 | -0.47 |
| delta_Rv3594 | -0.205 | 1.205 |
| delta_Rv3717 | -0.301 | 0.563 |
| delta_Rv3811 | -1.164 | -0.1 |
| delta_Rv0954 | -5.272 | -0.481 |
| PonA1 | -2.333 | -1.313 |
| EccD1_KO | -3.134 | 0.0 |
| EspI_KO | -3.037 | -0.87 |
| PE35_KO | -2.826 | -1.415 |
| PPE68_KO | -1.661 | -1.254 |
| glycerol2 | -0.193 | -0.177 |
| lignocerate | -0.168 | -0.32 |
| oleate | -0.196 | -0.179 |
| phosphatidylcholine | -0.193 | -0.368 |
| acetate | -0.229 | -0.209 |
| glucAc | -0.143 | -0.272 |
| Rv0950ko | -0.841 | -0.262 |
| Rv1096ko | 1.309 | -0.546 |
| Rv3684ko | 1.13 | -0.917 |
| delta_otsA_trehalose | 0.457 | -0.111 |