Top 10 genes with highest correlation to Rv3267/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1411c/lprG | (cc=0.7844) | info on Rv1411c/lprG |
| Rv1410c/- | (cc=0.729) | info on Rv1410c/- |
| Rv1111c/- | (cc=0.6193) | info on Rv1111c/- |
| Rv0050/ponA1 | (cc=0.5751) | info on Rv0050/ponA1 |
| Rv3670/ephE | (cc=0.5299) | info on Rv3670/ephE |
| Rv2224c/caeA | (cc=0.5253) | info on Rv2224c/caeA |
| Rv0637/hadC | (cc=0.5233) | info on Rv0637/hadC |
| Rv3794/embA | (cc=0.5198) | info on Rv3794/embA |
| Rv0017c/rodA | (cc=0.5147) | info on Rv0017c/rodA |
| Rv1747/- | (cc=0.5124) | info on Rv1747/- |
Correlation of Rv3267/- with Rv0050/ponA1
Normalized LFCs for Rv3267/-:
(description and provenance of datasets)
| Rv3267/- | Rv0050/ponA1 | |
| Fe_supp_jason_reseq | 3.866 | 0.508 |
| low_pH_jason_reseq | 0.0 | 0.192 |
| NO_jason_reseq | 0.788 | -0.16 |
| B6_jason_reseq | 0.119 | 0.777 |
| MHCII_jason_reseq | 0.458 | 0.058 |
| Isoniazid02 | 0.744 | -1.202 |
| Rifampicin4 | -5.041 | -1.156 |
| Ethambutol3 | -1.401 | -0.711 |
| Meropenem3 | -1.942 | -0.237 |
| Vancomycin16 | -5.306 | -4.51 |
| Rv2680_day32 | -0.642 | 0.058 |
| H37Rv_KO_MarP | -2.122 | -3.768 |
| hypoxia_3wks | 0.279 | -0.443 |
| hypoxia_6wks | -0.58 | -1.059 |
| glycerol | -0.992 | -0.146 |
| cholesterol | 0.482 | 0.398 |
| AJ | -0.698 | -0.644 |
| Bibs02 | -0.55 | -1.597 |
| Bibs02c | -1.028 | -0.399 |
| BL6 | 2.677 | 0.47 |
| BL6a | -0.277 | 0.319 |
| BXD01 | 0.0 | 0.322 |
| BXD010 | 0.543 | 0.316 |
| BXD011 | 0.08 | 0.966 |
| BXD03 | 0.243 | 0.604 |
| BXD04 | 0.855 | 0.634 |
| BXD05 | 0.836 | 0.877 |
| BXD06 | -0.187 | 0.33 |
| BXD07 | 0.393 | 0.452 |
| BXD08 | 0.31 | 1.558 |
| BXD09 | 0.089 | 0.69 |
| CAST | -0.501 | -0.439 |
| CCcont | 2.965 | 1.278 |
| DS01 | -0.926 | -0.084 |
| DS02 | -0.852 | -0.704 |
| DS04 | 0.239 | -0.453 |
| DS0c | -0.652 | 0.652 |
| GP01 | -0.387 | 0.396 |
| GP02 | -0.326 | 1.958 |
| GP0c | 1.465 | 1.151 |
| NOD | -1.103 | -0.428 |
| NZO | -0.98 | -0.553 |
| PWK | -0.963 | -0.831 |
| H37Rv_KO_CtpC | -0.109 | 0.213 |
| H37Rv_KO_CtpD | 0.787 | 0.566 |
| H37Rv_KO_Rv1272 | 0.658 | 0.048 |
| H37Rv_KO_SugABC | -0.138 | 1.16 |
| H37Rv_KO_MbtN | 0.391 | 0.484 |
| Trans05 | 0.554 | 0.249 |
| macrophage_unactivated | 0.0 | 0.65 |
| IL1 | -1.231 | 0.418 |
| Rapamycin | 0.181 | 1.188 |
| Tcell | -1.906 | 0.459 |
| GMCSF | 0.0 | 0.283 |
| IFNab | 2.543 | 0.72 |
| IFNg | -1.109 | 0.551 |
| IFNg_GMCSF1 | -1.059 | 0.748 |
| Rv1432_day32 | -0.198 | -1.068 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.533 | -0.47 |
| delta_Rv3594 | -0.205 | 0.179 |
| delta_Rv3717 | -0.301 | -0.799 |
| delta_Rv3811 | -1.164 | 0.107 |
| delta_Rv0954 | -5.272 | -1.601 |
| PonA1 | -2.333 | -2.956 |
| EccD1_KO | -3.134 | -0.661 |
| EspI_KO | -3.037 | -0.761 |
| PE35_KO | -2.826 | -1.817 |
| PPE68_KO | -1.661 | -0.442 |
| glycerol2 | -0.193 | -1.582 |
| lignocerate | -0.168 | -1.61 |
| oleate | -0.196 | -1.733 |
| phosphatidylcholine | -0.193 | -2.001 |
| acetate | -0.229 | -0.291 |
| glucAc | -0.143 | -0.088 |
| Rv0950ko | -0.841 | -0.305 |
| Rv1096ko | 1.309 | -0.151 |
| Rv3684ko | 1.13 | 0.809 |
| delta_otsA_trehalose | 0.457 | 0.564 |