Top 10 genes with highest correlation to Rv3267/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1411c/lprG | (cc=0.7844) | info on Rv1411c/lprG |
| Rv1410c/- | (cc=0.729) | info on Rv1410c/- |
| Rv1111c/- | (cc=0.6193) | info on Rv1111c/- |
| Rv0050/ponA1 | (cc=0.5751) | info on Rv0050/ponA1 |
| Rv3670/ephE | (cc=0.5299) | info on Rv3670/ephE |
| Rv2224c/caeA | (cc=0.5253) | info on Rv2224c/caeA |
| Rv0637/hadC | (cc=0.5233) | info on Rv0637/hadC |
| Rv3794/embA | (cc=0.5198) | info on Rv3794/embA |
| Rv0017c/rodA | (cc=0.5147) | info on Rv0017c/rodA |
| Rv1747/- | (cc=0.5124) | info on Rv1747/- |
Correlation of Rv3267/- with Rv1411c/lprG
Normalized LFCs for Rv3267/-:
(description and provenance of datasets)
| Rv3267/- | Rv1411c/lprG | |
| Fe_supp_jason_reseq | 3.866 | 3.964 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | 0.788 | 0.0 |
| B6_jason_reseq | 0.119 | 0.0 |
| MHCII_jason_reseq | 0.458 | 0.0 |
| Isoniazid02 | 0.744 | 1.312 |
| Rifampicin4 | -5.041 | -6.0 |
| Ethambutol3 | -1.401 | -2.503 |
| Meropenem3 | -1.942 | -2.344 |
| Vancomycin16 | -5.306 | -6.0 |
| Rv2680_day32 | -0.642 | 0.0 |
| H37Rv_KO_MarP | -2.122 | -4.73 |
| hypoxia_3wks | 0.279 | 1.176 |
| hypoxia_6wks | -0.58 | 1.725 |
| glycerol | -0.992 | 4.535 |
| cholesterol | 0.482 | 2.347 |
| AJ | -0.698 | -0.815 |
| Bibs02 | -0.55 | -0.642 |
| Bibs02c | -1.028 | -0.735 |
| BL6 | 2.677 | -0.315 |
| BL6a | -0.277 | -0.154 |
| BXD01 | 0.0 | -0.458 |
| BXD010 | 0.543 | -0.45 |
| BXD011 | 0.08 | 0.258 |
| BXD03 | 0.243 | -0.475 |
| BXD04 | 0.855 | -0.434 |
| BXD05 | 0.836 | 0.0 |
| BXD06 | -0.187 | -0.469 |
| BXD07 | 0.393 | -0.486 |
| BXD08 | 0.31 | -0.467 |
| BXD09 | 0.089 | -0.494 |
| CAST | -0.501 | -0.809 |
| CCcont | 2.965 | 3.583 |
| DS01 | -0.926 | -0.83 |
| DS02 | -0.852 | -0.764 |
| DS04 | 0.239 | 0.822 |
| DS0c | -0.652 | -0.762 |
| GP01 | -0.387 | -0.249 |
| GP02 | -0.326 | -0.292 |
| GP0c | 1.465 | 1.392 |
| NOD | -1.103 | -0.789 |
| NZO | -0.98 | -0.701 |
| PWK | -0.963 | -0.689 |
| H37Rv_KO_CtpC | -0.109 | 0.606 |
| H37Rv_KO_CtpD | 0.787 | 0.473 |
| H37Rv_KO_Rv1272 | 0.658 | -0.356 |
| H37Rv_KO_SugABC | -0.138 | 0.718 |
| H37Rv_KO_MbtN | 0.391 | 1.904 |
| Trans05 | 0.554 | -0.21 |
| macrophage_unactivated | 0.0 | -1.016 |
| IL1 | -1.231 | -0.955 |
| Rapamycin | 0.181 | 0.0 |
| Tcell | -1.906 | -1.049 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 2.543 | 3.304 |
| IFNg | -1.109 | -1.563 |
| IFNg_GMCSF1 | -1.059 | -1.012 |
| Rv1432_day32 | -0.198 | -1.106 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.533 | 1.331 |
| delta_Rv3594 | -0.205 | 1.49 |
| delta_Rv3717 | -0.301 | 2.768 |
| delta_Rv3811 | -1.164 | 0.953 |
| delta_Rv0954 | -5.272 | -3.981 |
| PonA1 | -2.333 | -2.838 |
| EccD1_KO | -3.134 | -2.746 |
| EspI_KO | -3.037 | -2.484 |
| PE35_KO | -2.826 | -2.789 |
| PPE68_KO | -1.661 | -2.7 |
| glycerol2 | -0.193 | 0.0 |
| lignocerate | -0.168 | 0.0 |
| oleate | -0.196 | 0.0 |
| phosphatidylcholine | -0.193 | 0.0 |
| acetate | -0.229 | 0.0 |
| glucAc | -0.143 | 0.392 |
| Rv0950ko | -0.841 | 0.193 |
| Rv1096ko | 1.309 | -0.41 |
| Rv3684ko | 1.13 | 1.189 |
| delta_otsA_trehalose | 0.457 | -0.468 |