Top 10 genes with highest correlation to Rv3256c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0813c/- | (cc=0.5325) | info on Rv0813c/- |
| Rv2609c/- | (cc=0.5255) | info on Rv2609c/- |
| Rv0806c/cpsY | (cc=0.4758) | info on Rv0806c/cpsY |
| Rv1957/- | (cc=0.4614) | info on Rv1957/- |
| Rv2404c/lepA | (cc=0.4613) | info on Rv2404c/lepA |
| Rv3312A/- | (cc=0.4528) | info on Rv3312A/- |
| Rv3920c/- | (cc=0.4373) | info on Rv3920c/- |
| Rv0092/ctpA | (cc=0.4189) | info on Rv0092/ctpA |
| Rv1407/fmu | (cc=0.4175) | info on Rv1407/fmu |
| Rv1330c/pncB1 | (cc=0.417) | info on Rv1330c/pncB1 |
Correlation of Rv3256c/- with Rv3312A/-
Normalized LFCs for Rv3256c/-:
(description and provenance of datasets)
| Rv3256c/- | Rv3312A/- | |
| Fe_supp_jason_reseq | -0.688 | -0.35 |
| low_pH_jason_reseq | -0.338 | -0.132 |
| NO_jason_reseq | 0.0 | 0.893 |
| B6_jason_reseq | -0.071 | 1.266 |
| MHCII_jason_reseq | 0.977 | 0.295 |
| Isoniazid02 | -1.73 | 0.941 |
| Rifampicin4 | 1.562 | 0.742 |
| Ethambutol3 | -0.23 | 0.548 |
| Meropenem3 | -0.612 | 2.13 |
| Vancomycin16 | -0.207 | 0.727 |
| Rv2680_day32 | -2.899 | -0.959 |
| H37Rv_KO_MarP | -0.291 | 0.344 |
| hypoxia_3wks | -1.782 | -0.231 |
| hypoxia_6wks | -2.518 | -0.395 |
| glycerol | 2.907 | 0.726 |
| cholesterol | -0.055 | 0.382 |
| AJ | -1.477 | 0.225 |
| Bibs02 | 0.42 | -1.288 |
| Bibs02c | 0.418 | -0.975 |
| BL6 | -1.306 | -0.038 |
| BL6a | 0.65 | -0.436 |
| BXD01 | -1.178 | 0.434 |
| BXD010 | -0.816 | -0.436 |
| BXD011 | -0.9 | -0.098 |
| BXD03 | -2.202 | 0.181 |
| BXD04 | -1.725 | -0.474 |
| BXD05 | -1.701 | 0.265 |
| BXD06 | -1.393 | 0.331 |
| BXD07 | -1.59 | 0.75 |
| BXD08 | -1.456 | -0.034 |
| BXD09 | -1.866 | 0.066 |
| CAST | -0.679 | -0.017 |
| CCcont | -0.514 | 0.157 |
| DS01 | -1.668 | -0.27 |
| DS02 | -1.174 | 0.274 |
| DS04 | 1.238 | 0.022 |
| DS0c | -0.343 | 0.064 |
| GP01 | -1.134 | 0.31 |
| GP02 | -1.43 | 1.1 |
| GP0c | -0.205 | 0.597 |
| NOD | -2.031 | 0.382 |
| NZO | -1.636 | -0.377 |
| PWK | -1.458 | -0.328 |
| H37Rv_KO_CtpC | -0.877 | -0.717 |
| H37Rv_KO_CtpD | -1.386 | 0.144 |
| H37Rv_KO_Rv1272 | -0.946 | -0.912 |
| H37Rv_KO_SugABC | 1.043 | -0.312 |
| H37Rv_KO_MbtN | -0.141 | 0.777 |
| Trans05 | 0.0 | -0.372 |
| macrophage_unactivated | 0.338 | 0.133 |
| IL1 | 1.391 | 0.113 |
| Rapamycin | 0.485 | 0.292 |
| Tcell | 0.978 | 0.336 |
| GMCSF | -0.813 | -0.034 |
| IFNab | -0.931 | -0.804 |
| IFNg | 1.849 | 0.551 |
| IFNg_GMCSF1 | 0.647 | -0.478 |
| Rv1432_day32 | -0.727 | 0.48 |
| Rv1565c_day32 | -4.854 | -3.838 |
| secA2_input | -0.712 | 0.243 |
| delta_Rv3594 | 2.47 | 1.41 |
| delta_Rv3717 | 3.651 | 1.221 |
| delta_Rv3811 | 2.668 | 0.55 |
| delta_Rv0954 | 1.009 | 1.469 |
| PonA1 | -0.223 | 1.13 |
| EccD1_KO | -1.365 | -0.747 |
| EspI_KO | -0.856 | -0.374 |
| PE35_KO | -0.957 | -0.875 |
| PPE68_KO | -2.921 | -0.771 |
| glycerol2 | -0.595 | 1.241 |
| lignocerate | -0.024 | 1.444 |
| oleate | -2.393 | 0.771 |
| phosphatidylcholine | -0.69 | 1.408 |
| acetate | 0.324 | 0.48 |
| glucAc | 0.681 | 0.764 |
| Rv0950ko | 1.182 | 0.519 |
| Rv1096ko | 0.63 | 0.452 |
| Rv3684ko | -0.802 | 0.252 |
| delta_otsA_trehalose | -0.965 | -0.354 |